Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1716 |
Symbol | |
ID | 1183353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1885961 |
End bp | 1886533 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637393088 |
Product | alpha-ribazole-5'-phosphate phosphatase, putative |
Protein accession | NP_791541 |
Protein GI | 28868922 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | [TIGR03162] alpha-ribazole phosphatase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.507425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTGC GTCTGGACCT GCTGCGCCAC GGTGAAACCG AACTGGGCGG CGGCCTGCGC GGTAGCCTGG ATGATGCGCT GACTGATCTC GGCTGGCAGC AAATGCGTTC GGCTGTTATT GACGGCGGCC CCTGGGACCG GATTGTCAGC TCGCCGTTGC AGCGCTGCGC ACGGTTTTCC GAAGAACTGG CGCAACGCCT GTCGTTGCCC TTGCAACTGG AGCCGGGTTT GCAGGAGCTG CATTTCGGTG ACTGGGAAGG CCACAGCCCT GCGCAACTGA TGGACACCGA TGCTGAAGGT CTGGGGTTGT TCTGGGCTGA CCCGTATACG TTCACGCCGC CCAATGGCGA GCCGGTGATC GATTTTTCAG CGCGGGTGCG CAATGCTGTG CAGCGCTTGC ATCAGGCGTA TGACGGTGAG CGCGTTCTGG TGGTCAGTCA CGGTGGCGTC ATGCGCCTGT TGCTGGCTCA GGCGCGCGGC TTGCCGCGTG AGCAGTTGTT GCAGGTGGTG GTCGGTCACG GCGCGCTGCT GTCGATTCAG GTCGCCGCTG GCGGTCTGCT CACGGAGGTC TGA
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Protein sequence | MSVRLDLLRH GETELGGGLR GSLDDALTDL GWQQMRSAVI DGGPWDRIVS SPLQRCARFS EELAQRLSLP LQLEPGLQEL HFGDWEGHSP AQLMDTDAEG LGLFWADPYT FTPPNGEPVI DFSARVRNAV QRLHQAYDGE RVLVVSHGGV MRLLLAQARG LPREQLLQVV VGHGALLSIQ VAAGGLLTEV
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