| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1711 |
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| Symbol | cobD |
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| ID | 1183348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1881031 |
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| End bp | 1881939 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637393083 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | NP_791536 |
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| Protein GI | 28868917 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGTGG CGCTGTTGAG CGTCGCCGGT GTGGCGCTGG ATGCGTTGCT CGGTGAGCCG
AAACGCTGGC ATCCACTGGT GGCGTTCGGA GGCTTTGCCA ACCGTGTCGA GCAACGCTTC
AACAGCGGCG GGCGTGGCTG GCGCAGTCAT GGCGTCACTG CCTGGGTGAT TACAGTCGTG
CCGTTGACGC TGCTGGCCAC GCTGTTGAGC TGGTTGCCTT ACATCGGCTG GCTGTTCGAG
ATTCTGGCGT TGTACTGCGC GCTGGGCATG CGCAGCCTGG GTGAGCACGT GCAGCCGGTG
GCGCAGGCGT TGCGCGCCGA TGATCTGGAC GAGGCGCGGC AGCGGGTCGG TTATCTGGTC
AGTCGCCAGA CCAGCGAGCT GGACGCCACC GAGGTCGCCC GCGCCGCCAC CGAGTCGGTG
CTGGAGAACG GCAGCGATGC GGTGTTCGCC GCCTTGTTCT GGTTTATCGT GGCCGGTGCG
CCCGGCGTGG TGCTGTACCG GCTGAGCAAC ACGCTGGACG CCATGTGGGG CTATCGCAAC
GAGCGTTTCG AGCGTTTCGG CTGGGCCGCG GCGAGAATAG ACGACCTGCT CAACTATATT
CCTGCACGCC TGGTGGCGCT GACCTACGCC TTGTTGGGCA AAACCCGACT GGCGCTGCAC
TGCTGGCGCA CTCAAGGGCC AACCTGGGAC AGCCCCAACG CAGGCCCGGT GATGGCCGCT
GGCGCAGGCG CGCTGGGCGT CGAACTGGGT GGCGCAGCTA TTTATCACGG CGAACTGCAT
GAGCGTGCGC AACTGGGCGA GGGCGCTCCT GCCGATGCGG ACTCGATCGA TCGCGGCTGG
CAACTGGTGC AACACGGCGT CTGGTTGTGG CTGCTGGTCA TTTGTGTGGC GGCTGAATTT
TATGCTTGA
|
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| Protein sequence | MSVALLSVAG VALDALLGEP KRWHPLVAFG GFANRVEQRF NSGGRGWRSH GVTAWVITVV
PLTLLATLLS WLPYIGWLFE ILALYCALGM RSLGEHVQPV AQALRADDLD EARQRVGYLV
SRQTSELDAT EVARAATESV LENGSDAVFA ALFWFIVAGA PGVVLYRLSN TLDAMWGYRN
ERFERFGWAA ARIDDLLNYI PARLVALTYA LLGKTRLALH CWRTQGPTWD SPNAGPVMAA
GAGALGVELG GAAIYHGELH ERAQLGEGAP ADADSIDRGW QLVQHGVWLW LLVICVAAEF
YA
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