Gene PSPTO_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1710 
Symbol 
ID1183347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1880384 
End bp1881034 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID637393082 
Productnitroreductase family protein 
Protein accessionNP_791535 
Protein GI28868916 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID[TIGR02476] cob(II)yrinic acid a,c-diamide reductase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGC ACGCCTTCAG CGCCGAAGAA CGGGCTGCGG TGTACCGCGC CATCGCCGAG 
CGCCGTGATA TGCGCCATTT CAGCGGCGGC ACGGTGGCGC CCGAACTGCT GGCGCGCTTG 
CTGGAAGCCG CGCATCAAGC GCCCAGCGTT GGCCTGATGC AGCCGTGGCG TTTCATCCGC 
ATCAGTGACC CGGCATTGCG CAGCAAGATG CAGGCGCAGG TTGAAGAAGA GCGCATCCGC 
ACTGCCGAAG CACTGGGCGA GCGCACCGAC GCGTTCATGA AGCTCAAGGT CGAGGGCATC 
AATGACTGCG CGGAAGTGCT GGTCGCCGCG CTGATGGAAG GTCGTGAGCA GCATATCTTT 
GGCCGTCGCA CCTTGCCGGA AATGGACATG GCTTCGTTGT CCTGCGCCAT TCAGAACCTC 
TGGCTGGCCT CGCGTGCCGA AGGGCTGGGC ATGGGCTGGG TGTCGCTGTT CGACCCTGAT 
GCGCTGGCCG CGCTGTTGAA CATGCCTGAA GGTGCCAAGC CGCTGGCGAT CATCTGCCTG 
GGGCCGGTGA ACGCATTTTA TCCTGCACCG ATGCTGGTCA TGGAGGGCTG GGCGCAGGCG 
CGTCCGCTGC ATGAACTGCT GTATGAAAAT CAATGGGGAG TGAGTCAATG A
 
Protein sequence
MTEHAFSAEE RAAVYRAIAE RRDMRHFSGG TVAPELLARL LEAAHQAPSV GLMQPWRFIR 
ISDPALRSKM QAQVEEERIR TAEALGERTD AFMKLKVEGI NDCAEVLVAA LMEGREQHIF 
GRRTLPEMDM ASLSCAIQNL WLASRAEGLG MGWVSLFDPD ALAALLNMPE GAKPLAIICL 
GPVNAFYPAP MLVMEGWAQA RPLHELLYEN QWGVSQ