| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1694 |
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| Symbol | relA |
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| ID | 1183331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1863888 |
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| End bp | 1866122 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637393066 |
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| Product | GTP pyrophosphokinase |
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| Protein accession | NP_791519 |
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| Protein GI | 28868900 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAGCGA ACCAGCCGAT AAACACAGAC GGCAGTATCA ATCTCGACGC ATGGCTCGAT
CATATTGTCA GCGTCGACCT GGTCCTGGAC CGGGAAGTCA TGAAGCAGGC CTGTGAATTT
GCCCGGCAAG CCGAGCAGAA TGACAAGGCT CACAAGAATC ATTGGGCAGA AGGCACCTCC
AGTTTCCAGA CCGGTCTGGA AATCGCGGAG ATCCTCGCTG ACCTCAAGCT GGATCAGGAT
TCGCTGGTCG CGGCGGTCAT GTACCGTGGC GTGCGCGAAG GCGTGATTCC GTTGCCGGAC
GTCGAGCAGC GCTTTGGTGC CACGGTCGCC AAGCTGATCG ACGGCGTGCT GCGCATGGCG
GCGATCAGCG CCAGCCTCAG CCCGCGACAA TCGCTGGTGC TGGGCAGCCA GGCGCAGGTC
GAAAACCTGC GCAAGATGCT TGTGGCGATG GTCGATGACG TGCGCGTTGC ACTCATCAAG
CTGGCCGAGC GCACCTGTGC GATCCGTGCG GTGAAGAACG CCGACGACGA AAAGCGCAAC
CGCGTGGCCC GCGAGGTGTT CGACATCTAT GCGCCGCTGG CCCACCGTCT GGGCATCGGC
CATATCAAAT GGGAGCTGGA AGACCTTTCT TTCCGCTACC TGGAGCCCGA CCAATACAAG
CAGATCGCCA AGCTGCTGCA CGAGCGCAGG CTCGATCGCG AGCGCTTCAT CAGCGACGTC
ATGTCCCAGC TCGACAATGA GCTGCAAGCC ACCGGCGTGA CGGCGGACAT CAGTGGCCGT
GCCAAGCACA TCTATTCCAT CTGGCGCAAA ATGCAGCGCA AGGGCTTGGC GTTCAGCCAG
ATCTACGACG TGCGTGCATT GCGCGTGCTG GTCCCGGAAA TGCGTGATTG CTACACCGCG
CTGGGTATCG TGCACACGCT GTGGCGGCAT ATTCCCAAGG AGTTCGACGA CTACATCGCC
AACCCCAAGG AAAACGGCTA TCGCTCGCTG CACACCGCCG TCATCGGGCC GGAAGGCAAG
GTGCTGGAAG TGCAGATCCG CACCCACGCC ATGCACGAAG AGGCCGAGCT CGGCGTTTGC
GCGCACTGGC GCTATAAAGG CACCGACGTC AAATCCAGCT CCAATCATTA CGAAGAAAAG
ATTTCCTGGC TGCGTCAGGT CCTTGAATGG CATGAAGAAC TGGGTGACAT CGGTGGTCTG
GCCGAGCAGT TGCGGGTCGA TATCGAGCCG GACCGTGTCT ACGTCTTCAC CCCCGACGGC
CACGCCATCG ACCTGCCCAA GAACGCGACG CCGCTGGACT TCGCCTATCG GGTGCACACC
GAGATCGGCC ATAACTGCCG TGGTGCGAAG ATCAACGGCC GCATCGTACC GCTCAACTAC
AGCCTGCAAA CCGGCGAGCA GGTCGAGATC ATCACCAGCA AGCACGGCAC GCCGAGCCGC
GACTGGCTGA ACTCCAACCT GGGCTACATC ACCACGTCCC GGGCGCGGGC GAAGATTGTT
CACTGGTTCA AATTGCAGGC CCGTGACCAG AACGTCGCGG CCGGTAAAAC CCTGATCGAA
CGTGAGCTGG CGCGTCTGGC GTTGCCGCAG GTCGATTTCG ACAAGCTGGC AGACAAAGCC
AATCACAAGA CCGCCGACGA TATGTTTGCC GCACTGGGCG CGGGGGATCT GCGCCTGGCG
CAACTGGTCA ACCTGGCGCA ACAGCAGGTC GAGCCGGATC GGGTTAATGA ACAACTGGAA
CTGATCCCGC GCAAGGCCAC CGGCTACAAG CCTGGCAAGC GCGGCGATAT CCAGATTCAG
GGCGTCGGCA ACCTGATGAC GCAAATGGCC GGCTGCTGCC AGCCATTACC GGGCGACGCG
ATTGTCGGGT ACATCACGCA GGGGCGTGGC GTCAGCATTC ACCGTCAGGA TTGCGCCTCG
GTGCTGCAAC TGGGCGGTCG CGAACCCGAG CGGATCATCC AGGTCAGTTG GGGCCCGGTG
CCGGTGCTCA CCTACCCGGT GGACATCATC ATCCGTGCCT ACGACCGTTC CGGCCTGCTG
CGTGACGTCA CCCAGGTGCT GCTCAACGAG CGCATCAACG TACTGGCGGT CAACACCCGC
TCGAACAAGG AAGACAACAC CGCGCTGATG TCGCTGACCA TCGAGATTCC GGGGCTGGAC
GCGCTGGGCC GGTTGCTGGG GCGGATATCC CAGTTGCCGA ACATTATTGA AACACGCCGA
AACAGGACGC CTTGA
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| Protein sequence | MRANQPINTD GSINLDAWLD HIVSVDLVLD REVMKQACEF ARQAEQNDKA HKNHWAEGTS
SFQTGLEIAE ILADLKLDQD SLVAAVMYRG VREGVIPLPD VEQRFGATVA KLIDGVLRMA
AISASLSPRQ SLVLGSQAQV ENLRKMLVAM VDDVRVALIK LAERTCAIRA VKNADDEKRN
RVAREVFDIY APLAHRLGIG HIKWELEDLS FRYLEPDQYK QIAKLLHERR LDRERFISDV
MSQLDNELQA TGVTADISGR AKHIYSIWRK MQRKGLAFSQ IYDVRALRVL VPEMRDCYTA
LGIVHTLWRH IPKEFDDYIA NPKENGYRSL HTAVIGPEGK VLEVQIRTHA MHEEAELGVC
AHWRYKGTDV KSSSNHYEEK ISWLRQVLEW HEELGDIGGL AEQLRVDIEP DRVYVFTPDG
HAIDLPKNAT PLDFAYRVHT EIGHNCRGAK INGRIVPLNY SLQTGEQVEI ITSKHGTPSR
DWLNSNLGYI TTSRARAKIV HWFKLQARDQ NVAAGKTLIE RELARLALPQ VDFDKLADKA
NHKTADDMFA ALGAGDLRLA QLVNLAQQQV EPDRVNEQLE LIPRKATGYK PGKRGDIQIQ
GVGNLMTQMA GCCQPLPGDA IVGYITQGRG VSIHRQDCAS VLQLGGREPE RIIQVSWGPV
PVLTYPVDII IRAYDRSGLL RDVTQVLLNE RINVLAVNTR SNKEDNTALM SLTIEIPGLD
ALGRLLGRIS QLPNIIETRR NRTP
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