Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1689 |
Symbol | |
ID | 1183326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1857514 |
End bp | 1857921 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637393061 |
Product | lipoprotein, putative |
Protein accession | NP_791514 |
Protein GI | 28868895 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3187] Heat shock protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.313858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGT GTGCACTCCT GAGCCTGATC GGCGCCGCGC TGCTGGTCGG TTGCACTGCT GACCCGCTGC CAATCCGCCA GGATCATGGC TACGTGATGG AATGGATCGG CGAACGTCCG CTGATCGACA ACAGCCGCCT GACCATGACC CTGGGCGCCG ATGGCCGCGC GTATGGCAAC GCTGGCTGCA ACCACTGGTT CGCGCCCTAC ACGCTGAACG ACCACACCAT CAGCTTCGGC GCCGTGGGCA AGACCCGCAA AATGTGCGCC CCGGCACTGA TGGAACAGGA ACAGCGCTTT ATCAAAGCCA TCAGCAGCGT GCAACGCTGG GACATCTCGC CCATCGAGCA ACTGCGCCTG TGGCCAGCCC AGGGCAAGCC ACTGCGCTTC TGGCTGGAAG ATAGCTGA
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Protein sequence | MKQCALLSLI GAALLVGCTA DPLPIRQDHG YVMEWIGERP LIDNSRLTMT LGADGRAYGN AGCNHWFAPY TLNDHTISFG AVGKTRKMCA PALMEQEQRF IKAISSVQRW DISPIEQLRL WPAQGKPLRF WLEDS
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