| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1683 |
|---|
| Symbol | |
|---|
| ID | 1183320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1853519 |
|---|
| End bp | 1854013 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637393055 |
|---|
| Product | peptidase, SprT family |
|---|
| Protein accession | NP_791508 |
|---|
| Protein GI | 28868889 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.781786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAAC AACTCAATTC CCGCGTTGAA ACCTGTTACC TACAAGCCGA AACCTTCTTC
AAACGCACCT TCAAACGCCC GGTGGTCAGC TTCCAGCTGC GTGGTCAAAA GGCCGGTGTC
GCGCACTTGC ACGAGAACCT GCTGCGCTTC AACCCGCAGC TGTACCAGGA AAACGCCGAA
GATTTCCTGC GCCAGACAGT CCCCCACGAA GTCGCGCACC TGGTCGCCCA CCAGCTGTTT
GGCGGCGGCA TTCAGCCGCA CGGCGAGGAG TGGCAACTGA TCATGCGCGG CGTCTATGAA
CTGCCGCCCA ACCGCTGCCA CACCTACGCC GTTCAGCGGC GCAGCGTGAT CCGTTACATC
TACCGCTGCC CTTGCCCGGA CAGCGACTTC CCGTTCACGT CTCAACGCCA CAGCATGGTA
CGCAAGGGCC GGCGCTACCT GTGCCGCCGC TGCCGCGAGC CGCTGATGTT CAGCGGCGAG
ACGCGCACGG AATAA
|
|---|
| Protein sequence | MHEQLNSRVE TCYLQAETFF KRTFKRPVVS FQLRGQKAGV AHLHENLLRF NPQLYQENAE
DFLRQTVPHE VAHLVAHQLF GGGIQPHGEE WQLIMRGVYE LPPNRCHTYA VQRRSVIRYI
YRCPCPDSDF PFTSQRHSMV RKGRRYLCRR CREPLMFSGE TRTE
|
|---|
| |