Gene PSPTO_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1675 
Symbol 
ID1183312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1846677 
End bp1847321 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content64% 
IMG OID637393047 
Productsiderophore biosynthesis protein, putative 
Protein accessionNP_791500 
Protein GI28868881 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2977] Phosphopantetheinyl transferase component of siderophore synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.541548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGTCA GTGGGCGTTT TGATCCGCAC AAGCTGGGTG CCGATGACTT TCAGCGCTGT 
GCCGTCCAGA CGCCTGCGAG CATTCAGCGC TCGGTCGCCA AGCGTCAGGC CGAGTTTCTC
GCCGGTCGCC TGTGCGCCCG CGAGGCGCTA AGCCAGCTTG ATGGCCGGCT GCATACCCCC
ACGCTGGGCG AAGACCGTGC GCCAATCTGG CCAAGTGATG TCTGTGGTTC GATCACTCAC
AGCACCGGCT GGGCCGCTGC GGTGGTGGCG CACAAGCAGC AATGGCGCGG GCTGGGGCTG
GACACAGAAA ACCTGCTGAG CCACGACCGC GCTTCACGCC TGGCCGGGGA AATCCTCACC
GCCGCCGAGC TGGCCGACAT GGCCGCCGGC CCGCAGGATC AACTAGCGTT GCGCGTCACC
CTGACCTTTT CGATCAAGGA AGCGCTGTTC AAGGCCCTTT ACCCCATCGT GCAAAAGCGC
TTCTATTTCG AAGATGCACA ATTGCTGGAG TGGTCCGCCG ACGGCAACGC CCGCCTGCGA
CTGCTGATCG ACCTGTCCAG CGAATGGCAT GCAGGCAAGG AGCTGGACGG CCAGTTCAAT
GTGCTGGGCG ATCATCTGTT GAGCCTGGTC GCGGTCGAAG GTTGA
 
Protein sequence
MLVSGRFDPH KLGADDFQRC AVQTPASIQR SVAKRQAEFL AGRLCAREAL SQLDGRLHTP 
TLGEDRAPIW PSDVCGSITH STGWAAAVVA HKQQWRGLGL DTENLLSHDR ASRLAGEILT
AAELADMAAG PQDQLALRVT LTFSIKEALF KALYPIVQKR FYFEDAQLLE WSADGNARLR
LLIDLSSEWH AGKELDGQFN VLGDHLLSLV AVEG