| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1643 |
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| Symbol | |
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| ID | 1183280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1800039 |
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| End bp | 1800626 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637393015 |
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| Product | hypothetical protein |
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| Protein accession | NP_791468 |
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| Protein GI | 28868849 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
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| TIGRFAM ID | [TIGR02292] yecA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.646938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCTTCG CTGAGCAATT AACCCGCCTG CAAGTCTTCC TCGATGCAGA TGAACTGCAC
GAAGAAGCAC TGGACTACGT GGCCGCGCAC GGCTACCTGA CCGCCTTGTC CATCTGTGCC
GAAGACGTGC CGGAGCGCGA GTGGATCGAC GCGCTGTTCT CCGAGCCGCC ACAGTATTCC
GACATAGCAC AACAAACCGA GGTCGAAGCG ACACTGGTTG CACTCAAGGC GCACATTGCC
CGCCAACTGG CATCGGACGA AGAGTTCGAA CTGCCCTGCG ACCTGGACCT GGGCGACGAC
CCGGATGATT CGGACTTGCG CGGCTGGTGC ATCGGCTTCA TGGAAGGCGT GTTCCTGCGT
GAGAACGCCT GGTTCGAAAG CGCCGAAGAA GAAGTCAGCG AAATGCTCCT GCCGATCATG
GTCGGTTCGG GGCTGTTCGA CGAGCAACCT GAATTCGCCG ACATCGCTCA GGACGCCAAC
CTGATGGACG ACATGATCGT GCAGATCCCT GAAGCACTGA CGGCCCTGTA CCTGCTGTGC
CAGGCGCCGG ACGAAAAACC GGCGATCCTC AAACCCCGCC ACCACTGA
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| Protein sequence | MSFAEQLTRL QVFLDADELH EEALDYVAAH GYLTALSICA EDVPEREWID ALFSEPPQYS
DIAQQTEVEA TLVALKAHIA RQLASDEEFE LPCDLDLGDD PDDSDLRGWC IGFMEGVFLR
ENAWFESAEE EVSEMLLPIM VGSGLFDEQP EFADIAQDAN LMDDMIVQIP EALTALYLLC
QAPDEKPAIL KPRHH
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