Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1628 |
Symbol | |
ID | 1183265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1784377 |
End bp | 1784709 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637393000 |
Product | hypothetical protein |
Protein accession | NP_791453 |
Protein GI | 28868834 |
COG category | [S] Function unknown |
COG ID | [COG1742] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.229773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAATT ACCTGTGGTT TTTCCTCGCC GCCCTGTTCG AGATAGCTGG CTGCTACGCT TTCTGGCTCT GGCTGCGTCA GGGTAAAAGT GCGCTGTGGG TGATTCCGGC GCTGATCAGC CTGACGCTGT TCGCCTTGCT GTTGACGCGT GTGGAAGCGG CTTATGCCGG GCGAGCCTAT GCGGCGTATG GCGGGATTTA CATTGTGGCG TCGATTGCCT GGCTGGGGCT GGTGGAGCGG GTCAGGCCGC TGGGCACCGA CTGGCTGGGG CTGGCGTTTT GCGTGATCGG CGCGACGATC ATTCTGCTGG GGCCGCGCTG GTCAGCGCCC TGA
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Protein sequence | MLNYLWFFLA ALFEIAGCYA FWLWLRQGKS ALWVIPALIS LTLFALLLTR VEAAYAGRAY AAYGGIYIVA SIAWLGLVER VRPLGTDWLG LAFCVIGATI ILLGPRWSAP
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