Gene PSPTO_1628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1628 
Symbol 
ID1183265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1784377 
End bp1784709 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content63% 
IMG OID637393000 
Producthypothetical protein 
Protein accessionNP_791453 
Protein GI28868834 
COG category[S] Function unknown 
COG ID[COG1742] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.229773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAATT ACCTGTGGTT TTTCCTCGCC GCCCTGTTCG AGATAGCTGG CTGCTACGCT 
TTCTGGCTCT GGCTGCGTCA GGGTAAAAGT GCGCTGTGGG TGATTCCGGC GCTGATCAGC
CTGACGCTGT TCGCCTTGCT GTTGACGCGT GTGGAAGCGG CTTATGCCGG GCGAGCCTAT
GCGGCGTATG GCGGGATTTA CATTGTGGCG TCGATTGCCT GGCTGGGGCT GGTGGAGCGG
GTCAGGCCGC TGGGCACCGA CTGGCTGGGG CTGGCGTTTT GCGTGATCGG CGCGACGATC
ATTCTGCTGG GGCCGCGCTG GTCAGCGCCC TGA
 
Protein sequence
MLNYLWFFLA ALFEIAGCYA FWLWLRQGKS ALWVIPALIS LTLFALLLTR VEAAYAGRAY 
AAYGGIYIVA SIAWLGLVER VRPLGTDWLG LAFCVIGATI ILLGPRWSAP