| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1623 |
|---|
| Symbol | |
|---|
| ID | 1183260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1780267 |
|---|
| End bp | 1780578 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637392995 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_791448 |
|---|
| Protein GI | 28868829 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3162] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA GCATTTACCT CTCGATTCAA AACAGCCCCC GTTTCAAGGA GCTGGTATCC
AAAAGAGAGC GTTTCGCCTG GATTCTTTCG GCGATCATGC TTGGCCTGTA TGCGGCCTTT
ATTCTTTTGA TTGCTTACGG GCCCCATATT CTGGGTGCCA AGTTGAGCCC GACTTCAACC
ATTACCTGGG GAATGCCGAT AGGCGTAGGG CTGATCCTTT CTGCGTTTGT GTTGACCGCC
ATCTATGTTC GCCGTGCCAA TGGCGAATTC GATGACTTGA ACAACGCCAT CCTGAAGGAG
GCTCAGCAAT GA
|
|---|
| Protein sequence | MNDSIYLSIQ NSPRFKELVS KRERFAWILS AIMLGLYAAF ILLIAYGPHI LGAKLSPTST
ITWGMPIGVG LILSAFVLTA IYVRRANGEF DDLNNAILKE AQQ
|
|---|
| |