Gene PSPTO_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1619 
Symbol 
ID1183256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1775263 
End bp1775943 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content55% 
IMG OID637392991 
Producthypothetical protein 
Protein accessionNP_791444 
Protein GI28868825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCACTT TTAACTGCCC GGCTACTCAC ATGCCTCAGG CGAAAGTGCC TCGCTCCATT 
AACAGTCAAA AAGGAATTTC CATGCGGTCT TTCGGTTTCA AGGCAATAGC GGTGTGTGTC 
GCGCTGGCTG CCAGCCAGGT TGCAATCAAC GTACAAGCGG CCACCAAGGT CGAGGCTGCT 
GCACCTGTTA CGGCGCCAGT GCCTGCTGCG CAGAAGGTTT CGTTGTTGGG CGGCAAACTG 
GCGTTTACCG TGCCTGCGGG CTATGTGCAG GGTGAAATGC CAGAAGTAGA CGCGAAGGCA 
AAAGCTCAGG GCGTATACGG AAAGATGTAC ACCAATGCTA CGGAAAAACG CGTGCTCATT 
GTCACGGAAA CAACGCTGCC CATGAGCGTT GAGGCTAGCG ATAACGATTC GGCCATGCTC 
GACGGCATAG CGGCTGGCAT CGTTGACCAT CAGAGCGCTG GCTACAAGGA CTTCAAAAAA 
CTGAGCGAAC GCAAGATCGT CAAGAAAAAC GGCCTAGGTG TGCGCCAAGT AGACAGTTCA 
GCCACGATGA GTGACGCGAA GGTGCTGACC ACGTCGATCA TTGCCGCATC GGGTACTCGC 
GCAGCTGTTT TGAACGTGGT GTCCAACGCG AAAAATCCGA AAGAGCAGGC AGCACTGGTG 
AAAACAGTCA TCGGTGAGTG A
 
Protein sequence
MGTFNCPATH MPQAKVPRSI NSQKGISMRS FGFKAIAVCV ALAASQVAIN VQAATKVEAA 
APVTAPVPAA QKVSLLGGKL AFTVPAGYVQ GEMPEVDAKA KAQGVYGKMY TNATEKRVLI 
VTETTLPMSV EASDNDSAML DGIAAGIVDH QSAGYKDFKK LSERKIVKKN GLGVRQVDSS 
ATMSDAKVLT TSIIAASGTR AAVLNVVSNA KNPKEQAALV KTVIGE