| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1617 |
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| Symbol | |
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| ID | 1183254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1773000 |
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| End bp | 1774217 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392989 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_791442 |
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| Protein GI | 28868823 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCTC TGGAAACTGC CGCCTCTGGC ACCACGAGCG AAAGCTCGAC CGGTGCTGGT
TTGTCCATCG CGATTCTGGC GCTGGCCGGC TTCGTGATTG TCACCACTGA ATTTCTCATC
ATCGGGCTGT TGCCATCACT GGCCCGCGAT CTGGGAATCT CCATCTCAAC GGCCGGCTTG
CTGGTCACAC TGTTCGCCTT CACGGTGATG CTCTTCGGCC CGCCGCTGAC CGCCATGCTT
TCGCACCTGG ACCGTAAACG CACCTTTATC GTCATCCTGC TGATCTTCGC GGCATCCAAT
GCGCTGGCAG CGGTGTCGAG CAATGTCTGG ATACTCGCAC TGGCACGATT CATCCCGGCA
CTGGCATTGC CAGTGTTCTG GGGCACCGCC AGCGAAACCG CAAGCTTGCT GGCCGGGCCC
AAGCGCGCGG GCAAAGCCGT TGCGCAGGTG TACCTCGGCA TCTCTGCCGC AATGCTGTTC
GGTATTCCGC TGGGCACTCT GTTTGCTGAC GCAGTGGGCT GGCGCGGCGC GTTCTGGGCG
CTGACTGTCC TGTCTGCCTT GATGGCCCTG CTACTGGCGC TGTCGATGCC ACGTCTGGAA
CCTACCGCCA AGGTCGGCCT CGCCGAGCAA GCGAAAATCC TGCGTGACCC GCTTTTTCTG
GCCAACCTGC TGCTGTCCAT TCTGCTGTTC ACGGCGATGT TTGGTGCTTA CACCTACCTG
GCAGATACGC TGGAGCGCAT CGCCGGTATC GAGTCGGCTC AGACAGGCTG GTGGCTAATG
GGCTTCGGTG CGGTCGGCCT GATCGGCAAC GCACTGGGTG GTCGTTACGT AGATAGCAGC
CCACTGGGCT CGACCATGGT CTTCGCGCTG CTGCTGGCGC TGGGCATGAC GGCGAGCGTA
CCGGCAGCAG GCTCGCTGCC ACTGCTGGCG GTGGTGCTCG TGGTATGGGG GATTGCCCAT
ACGGCGTTGT TCCCGATCTG TCAGATCCGG GTGATGAAAG CCGCACCTCA GGCTCAGGCC
CTGGCCGGCA CCTTGAACGT GTCGGCGGCC AATGCCGGAA TCGGGCTGGG CTCGATTATC
GGCGGCCTTA CCATCGAGCA TCTGGGCCTG AACGCAGTGG GGTATGTCGC CGCCATCGTG
GCATTGCTGG CTATCGCCGT CGCATGGATG ACCAGCGTTC AGCAAGGCCG GATTGAGAAA
CACAACGTCT GCGCGTAA
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| Protein sequence | MPSLETAASG TTSESSTGAG LSIAILALAG FVIVTTEFLI IGLLPSLARD LGISISTAGL
LVTLFAFTVM LFGPPLTAML SHLDRKRTFI VILLIFAASN ALAAVSSNVW ILALARFIPA
LALPVFWGTA SETASLLAGP KRAGKAVAQV YLGISAAMLF GIPLGTLFAD AVGWRGAFWA
LTVLSALMAL LLALSMPRLE PTAKVGLAEQ AKILRDPLFL ANLLLSILLF TAMFGAYTYL
ADTLERIAGI ESAQTGWWLM GFGAVGLIGN ALGGRYVDSS PLGSTMVFAL LLALGMTASV
PAAGSLPLLA VVLVVWGIAH TALFPICQIR VMKAAPQAQA LAGTLNVSAA NAGIGLGSII
GGLTIEHLGL NAVGYVAAIV ALLAIAVAWM TSVQQGRIEK HNVCA
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