| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1610 |
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| Symbol | |
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| ID | 1183247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1764582 |
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| End bp | 1766756 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392982 |
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| Product | TonB-dependent siderophore receptor, putative |
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| Protein accession | NP_791435 |
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| Protein GI | 28868816 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.317263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACGC CATACCGACC TGCCATGCAT CACGCTTGGC GATTGCTGCC CCTGGGGATG
GCGGTCGCCT CGCCGCTGCT GGCCGCAGAG CCGCTCAATC TGGATGCGGT CAACGTAACC
GGGTTCAGCG AGCAGGAAAG CGCCAGCGAC TATAGAGCTG GCCGTGCATC GATTTATGGG
CTCGATCAGG CTTTGTTGCT CGACACGCCC GCTTCGGTGT CGGTGTTCAG CGAAGCGCTG
ATCAAGGACC GTCAGGCAAA GCTGCTGAGT GACGTGCTGC GCAACGATGC CTCGGTGGGC
GAGGGCTATG CGCCGGTGGG CTATTACGAA AACTTTGTGG TGCGCGGCTT CTCGTTGAAC
GCGGCCAACA GCTATCGCAT CAATGGCCGC AGCATCGCCG GCGAGCAGAA CGTGGCGCTG
GAAAACAAGC AACAGGTCGA GCTGCTTAAA GGCTTGTCTG GCCTGCAGAG CGGCGTTTCC
GAGCCGGGTG GCGTCATCAA CTATCAGACC AAACGCGCGC AGGACGTCCG GTCGGTCACG
GTGTCCAGCA ACGAGCACGG TGAGCGCTAC ATTGCCACCG ACGTCGGCGG CTGGTTCGGC
AGCGAGCAGC AATTCGGTCT GCGCGCCAAC CTGGCTCACG AAGACATTCG TTCCTATGTC
GAGCATGCCG ACGGTCAGCG CGATTTTGCA TCGCTGGCGT TCGACTGGAA CATCAGCGAG
CGGGCCTTGC TGCAACTGGA CGTCGAGTAC CAGAACAAAG AGCAGCGCTC GGTGCCCGGT
TATCAACTGC TGGGCGGTAC AACGCTGCCC CACGATGCCT CGCCGCGCAA ACTGCTGGGC
TATCAGAACT GGTCCAATCC GGTGGGTATC GAATCGCTGA ACATGAGCGG GCGCTTCGAA
TACCGGTTCA CTGACAGCTG GAAGGGCAGC CTCAGTGCAT CGCGCAGCCG GGTGGTCATC
GATGACTACA GCGCCTTTGC GTGGGGCTGC TATGGTTCGG CCAGTTGCGC AACAGAAGCT
GTGCCCAACC ATTTCAGCGC CGAGGGGGGG TATGACATCT ATGACTTCCG CAGCCCCGAC
GACACGCGTC GCAACGATGA GGTCGAGGCG GCGATGTCTG GCACCTTCGC GACCGGGGCT
CTCGAGCATC AACTGACCTT CGGCACCAGC GCCTACCGGC GCACCGTAGA CACGCGCGGC
ACCTTCAACG AGTTTGTGGG CTCGGGCAAC ATCAATGAAT CGCCTGAGCC GGTCGCGCCG
TCCAGCCTGC CACTGACGCA CACTGAGCGC CGTCTGGACA GCCGCCAGTA CGGGCTGTTT
GTCAGCGACC GTATCAGCTT CAACGACCGT TGGCAGGCGG TGCTGGGCGG GCGTGAGGTC
CGGCTTGATG AACGGGCCTT CAACGAGGAC GGCAGCGATG CGCGGCACAC CGAACGTTAC
GTGTTTCTGC CGCAGGCGGC GCTGATTTAC AAGCCGCTGG ACAACATTTC GTTGTACACC
AGCTACAGCA AGGGCCTCTC GCTGGGCGGG ACAGCCGCCT GGTTCACCAC CAACGCCAGC
GAAATTCTCG CACCGACCGT ATCGCGGCAA CTTGAGGCGG GCATCAAGTA CGACTGGCAA
CGCATGAGTC TGACCGCGGC GCTGTTTCAG GCCCGTCAGG CCTACCAGTA TTCCAGGCCC
AACGATGACG GCACCTTTAC CTACGTTCAG CAGGGCGAAC AGAAGAACAC CGGGCTTGAA
CTGGGCGCGA GGGGCTGGCT GACCGACCGC CTGCAGATAT CGGCAAGTGC GGCCGCTATT
CGTGCACGGG TCGAAGGCAG CGGCACCGAG GCCTATGAAG ACCATCAGGC GCTCAACGTG
CCCAAATACC GCGCTACGCT GCAAGCCGAT TACAGCCTGC CGATTCGCGG CCTGGCCCTG
CTTGGCGGTA TGCAGTACAG CGCCAGCAAA TATGCCGACC GCACAGGCTC GGTACAGGTC
AACGACTACG CGCTGTTCAA CCTCGGCAGC CGCTACAGCA CCAAAGTGGG CGGGTATGAC
ACCGTACTGC GCCTGACCGT TGATAACCTG TTCGACAAAC GCTACTGGCG CGACGCCGGG
GAATACCTGG GCGATGATTA CCTGTTCATG GGCGCCCCGC GAACGGCAAG CTTGTCTGCA
TCGGTCAACT TCTAA
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| Protein sequence | MSTPYRPAMH HAWRLLPLGM AVASPLLAAE PLNLDAVNVT GFSEQESASD YRAGRASIYG
LDQALLLDTP ASVSVFSEAL IKDRQAKLLS DVLRNDASVG EGYAPVGYYE NFVVRGFSLN
AANSYRINGR SIAGEQNVAL ENKQQVELLK GLSGLQSGVS EPGGVINYQT KRAQDVRSVT
VSSNEHGERY IATDVGGWFG SEQQFGLRAN LAHEDIRSYV EHADGQRDFA SLAFDWNISE
RALLQLDVEY QNKEQRSVPG YQLLGGTTLP HDASPRKLLG YQNWSNPVGI ESLNMSGRFE
YRFTDSWKGS LSASRSRVVI DDYSAFAWGC YGSASCATEA VPNHFSAEGG YDIYDFRSPD
DTRRNDEVEA AMSGTFATGA LEHQLTFGTS AYRRTVDTRG TFNEFVGSGN INESPEPVAP
SSLPLTHTER RLDSRQYGLF VSDRISFNDR WQAVLGGREV RLDERAFNED GSDARHTERY
VFLPQAALIY KPLDNISLYT SYSKGLSLGG TAAWFTTNAS EILAPTVSRQ LEAGIKYDWQ
RMSLTAALFQ ARQAYQYSRP NDDGTFTYVQ QGEQKNTGLE LGARGWLTDR LQISASAAAI
RARVEGSGTE AYEDHQALNV PKYRATLQAD YSLPIRGLAL LGGMQYSASK YADRTGSVQV
NDYALFNLGS RYSTKVGGYD TVLRLTVDNL FDKRYWRDAG EYLGDDYLFM GAPRTASLSA
SVNF
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