Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1605 |
Symbol | |
ID | 1183242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1759601 |
End bp | 1760776 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392977 |
Product | sensory box histidine kinase |
Protein accession | NP_791430 |
Protein GI | 28868811 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.747269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGCTTG AGCAGGAGAG TCTGCCGGCA ACAGGCGAGC TGTACGAACA TGCAGCCTGC GGCCTGCTGG TGACGTTGCC CAATGGCACG ATAGAACGTG CCAATCTGAC CTTCTGCCGC TGGCTGGGGC TGGAGCGCGA GGCGGTGATC GGCCGACGCT TCCAGGACCT GTTGAATCTG GCAGGCAAAG TCTTTCTGCA AACACATTGG GCACCGCTGT TGCAGACCCA AGGATCGATT GCCGAAGTCA AAGTCGAGCT GATCCACGCC GATGGCCGCT CGGTGCCCAT GATGCTCAAC GCCATACGCC GTGAGTACCC GTCAGGGTTT CTGCACGAGG TGGCAGTGTT TCTGGCCGAG GAACGCAACA AGTACGAACG TGAATTGCTG GCCGCACGCA AGCTGGCCGA AGAGCTGCTG CAGCATCAGA TGACGGTTCA GAGCGAGCTG ACCTCGGCAC GCAACCGCCT GCGTCTGGCC CACGCCGAGG CAGAAATACG AGCGATTTTT GCCGAACAGA TGATCGGTAT TGTCAGTCAC GACCTGCGCA ATCCGCTGGC GGCGATCAAG ATGGCTGCCG GGCTGCTGGA GCGTACCAAG CTCGAGTCGC GGCAGGAGCG CATTCTGGGG CATATCCATC ATTCCACCGA CCGTGCCGAG CGCATGATTG TCGATCTGCT GGACTTCACC CATGCCCGTG TCGGCAGCGG CATCACCGTG GTCCCTCAGC TTATCGACCT GCACGCGGTT GTCGCCCGAG GTGTGGAGGA GCTGCGTCAG GTGTTCCCCC ACCGTGTGTT GGTTCATCGC AGCGAGGGGC AGGGCGCGTG CTCGGCTGAC CCTGATCGTC TGTTGCAGGT GCTCGGTAAT CTGGTCAGCA ACGCTGTCAA TTATGGCGAA GATGGCAGCG ATATTCTGAT TACCTCATCG TTCGAGACTT ACCTCATCAA GTTGTCGGTG CACAATTTCG GCGAGCCGAT ACCGCTGGAA AAAGTCGACG ATCTCTACGA GCCCGTGATG CATGTGGTCA GCGACAGCGA TGAAACCAGA ACCGTCGGTC TGGGTTTGTT CATCGTCCGC GAGATTATTC GGGCACACCT GGGCGAGATA ACGGTTAGTT CTTCGACCGA CGCGGGCACA ACCTTCACAG TCGCCTTTCC GCGTCCGGTT GTATGA
|
Protein sequence | MLLEQESLPA TGELYEHAAC GLLVTLPNGT IERANLTFCR WLGLEREAVI GRRFQDLLNL AGKVFLQTHW APLLQTQGSI AEVKVELIHA DGRSVPMMLN AIRREYPSGF LHEVAVFLAE ERNKYERELL AARKLAEELL QHQMTVQSEL TSARNRLRLA HAEAEIRAIF AEQMIGIVSH DLRNPLAAIK MAAGLLERTK LESRQERILG HIHHSTDRAE RMIVDLLDFT HARVGSGITV VPQLIDLHAV VARGVEELRQ VFPHRVLVHR SEGQGACSAD PDRLLQVLGN LVSNAVNYGE DGSDILITSS FETYLIKLSV HNFGEPIPLE KVDDLYEPVM HVVSDSDETR TVGLGLFIVR EIIRAHLGEI TVSSSTDAGT TFTVAFPRPV V
|
| |