Gene PSPTO_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1602 
Symbolcdd 
ID1183239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1758068 
End bp1758505 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content58% 
IMG OID637392974 
Productcytosine deaminase 
Protein accessionNP_791427 
Protein GI28868808 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.574395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCAT TCATGCAGGC TGCAATCGAT GAGGCGCAAC TGGGGCTGGA TGAAGGCGGA 
ATCCCCATCG GCTCGGTCAT CGTTCACGCA GGCAAGATCA TCGGCCGGGG CCATAACCGC 
CGGGTGCAAG AGGGCAGTGC CACACGACAT GGCGAGATGG ACGCACTGGA GAACGCCGGT 
CGTCAACCCG CCAGCGTGTA CCGTGAAGCG GTGCTCTACA CCACGCTGTC CCCTTGCGCG 
ATGTGCAGTG GCGCAATTTT GCTTTACGGC ATTCGCAAAG TAATCGTTGG CGAAAACCAT 
TCATTCATGG GTGAGGAAGA ACTGCTGCGT TCGCGCGGTG TGCAGATCGA GGTGCTTGAT 
AACGAACGCT GCAAGCACAT GATGCAAGGT TTCATCGCCG ACAAGCCCGA ACTGTGGAAC 
GAAGACATCG GCGAGTAA
 
Protein sequence
MDAFMQAAID EAQLGLDEGG IPIGSVIVHA GKIIGRGHNR RVQEGSATRH GEMDALENAG 
RQPASVYREA VLYTTLSPCA MCSGAILLYG IRKVIVGENH SFMGEEELLR SRGVQIEVLD 
NERCKHMMQG FIADKPELWN EDIGE