| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1597 |
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| Symbol | |
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| ID | 1183234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1754264 |
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| End bp | 1755235 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637392969 |
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| Product | ribonuclease BN, putative |
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| Protein accession | NP_791422 |
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| Protein GI | 28868803 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.294731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTCC CCCATTTGCG TCAACTGCGA GTCAGCAAAG TGCTGTTGCG CACCGTCAAT
GAGTTTCTTG ACGACGAGAT GTCCACCTAC GCTTCGGCAC TGGCTTACCA GATGCTGTTT
TCGTTGTTCC CGTTTCTGCT GTTTCTGATC GCCTTGATCG GTTTTCTGCA TCTGCCTGAC
TTTTTCTCGT GGCTGCGCCT GCAATCCGAG TTGGTCCTGC CCCCGCAGGC CTTGGAGCAG
GTCAACCCGG TCATTGACCA GTTGCAGCAA TCCAAGGGCG GCTTGCTGTC GATCGGTATC
GTGATCGCTT TGTGGACCGC TTCGGCGGGT GTGCGCCTGA TGATGAGCGC CATGAACGCT
GCCTATGATG TGGTTGAAGG ACGCCCTATC TGGAAACGCT TTCCGCTGTC GATTCTCTAC
ACCGTCGGTA TTGCCGGCAT GTTGCTCGCA GCAGCGGCAT TCATGGTGCT CGGCCCGCAG
GTGATGAACT GGATCGCGGC GCAGATCGGC ATGGAAGACT TTATTGTCAC GTTGTGGACC
ATCCTGCGCT GGCCGGCAAT CATCCTGCTA TTGATGGTCG CTGTGGCGTT GATCTACTAC
GTGATGCCTG ACGTGAAACA AGAGTTTCGT TTCATCACGC CCGGCTCGGT GCTGGCCGTG
GTGGTGTGGA TTGTCGCCTC GCTGGCATTC GGCTTCTACG TCAAGACGTT TGCCGACTAC
AACGCCATGT ACGGCAGCAT TGGTGCGATC ATTGTGCTGT TGCTGTACTT TTATATTTCC
GCTGCCGTGC TGTTGCTGGG GGCGGAAATG AATGCGGTGA TCGAGCACAT GTCCGCAGAA
GGCAAGGAAG CAGGCGAGAA AGAACCGGGC GACGGCCTGG GTGACGAGCA GAACGAAGCG
GGCGGCAAGC AGCACGTTTC CGGCCTGGGC CGCGATCATT CAGTGCCATT GCCGAAGGCT
GACGAAACCT GA
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| Protein sequence | MIFPHLRQLR VSKVLLRTVN EFLDDEMSTY ASALAYQMLF SLFPFLLFLI ALIGFLHLPD
FFSWLRLQSE LVLPPQALEQ VNPVIDQLQQ SKGGLLSIGI VIALWTASAG VRLMMSAMNA
AYDVVEGRPI WKRFPLSILY TVGIAGMLLA AAAFMVLGPQ VMNWIAAQIG MEDFIVTLWT
ILRWPAIILL LMVAVALIYY VMPDVKQEFR FITPGSVLAV VVWIVASLAF GFYVKTFADY
NAMYGSIGAI IVLLLYFYIS AAVLLLGAEM NAVIEHMSAE GKEAGEKEPG DGLGDEQNEA
GGKQHVSGLG RDHSVPLPKA DET
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