Gene PSPTO_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1594 
Symbol 
ID1183231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1752749 
End bp1753153 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content64% 
IMG OID637392966 
Producthypothetical protein 
Protein accessionNP_791419 
Protein GI28868800 
COG category[S] Function unknown 
COG ID[COG4852] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TACTGACGGC TTACATCGGC ACGCTGCTGG CGTTTCTGAT CCTCGACGGC 
TTATGGCTGG GCGTACTCAT GGGGCCGACC TACCGAGAAT GGCTCGGGCC GCTGATGCTG
GCCACACCCG TATTGGGCCC TGCGATTGCG TTTTATCTGC TCTACGGCGC GGGTGTGGTG
GTGTTCGGCG TGATGCCAGC CGTCAGGGAG CAGCGCTTGA GCCGCGCGAC CCTGTTCAGT
GGTCTGCTGG GGCTGGTTGC CTACGGCACC TACGACCTGA CCAACTGGGC GACGTTGCAG
GGCTGGCCTG CGCAACTGGC GCTGGTAGAT CTCGCGTGGG GCACGGTGGT GTCGGCACTG
GCCGGCACGG CAGGGTATCT GGCCGTTCGA CGCTTCGGCG GTTAG
 
Protein sequence
MKKILTAYIG TLLAFLILDG LWLGVLMGPT YREWLGPLML ATPVLGPAIA FYLLYGAGVV 
VFGVMPAVRE QRLSRATLFS GLLGLVAYGT YDLTNWATLQ GWPAQLALVD LAWGTVVSAL
AGTAGYLAVR RFGG