| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1589 |
|---|
| Symbol | |
|---|
| ID | 1183226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1748298 |
|---|
| End bp | 1749161 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637392961 |
|---|
| Product | lipoprotein, putative |
|---|
| Protein accession | NP_791414 |
|---|
| Protein GI | 28868795 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCTC TGTTGAAAGC CTTCATCACC CTGTTGATGA CCGTATCGCT GCTTGCCGGA
TGCAATCAGG TCGGGCTGGC GTATCGCAAT CTGGATGTGA TCATTCCGTG GACGCTCAGC
GACTACCTGG ACATGAACTC GGAGCAGAAA AGCTGGCTGG ATGTGCGCCT CAAGCAACAC
CTGAGCTGGC ATTGCAGCAC GCAACTCCCG GAATACCTGG CCTGGCTGGA CAAGCTGGAG
GACATGGTCA AGAACGACCG TGTGACCTAT GAAGGGCTTG AGGCCCGCAC CAGCGAGGCC
AAAGACGCGA TAGCAAAGAT CTCCCGGGAA ATCACCCCGT CAGCTGTGGA ACTGCTGTCG
CGCTTTGACG ACAAGCAAGT ACAGGAAATG CAGGAGTCGT TCGCCAAGGA TCAGCGCAAG
CGCGAGAACA AATACCTCGA CCAGCCGCTG GAACGCCAGA TTGCCGAGCG CGCCGACCGC
ATGCAAAAAC GCCTGACCCC ATGGATCGGC AAATTGAATC AGGTGCAGAA GGATCGAATT
CAGGCCTGGT CCGCCTCGCT CGGCGAGCAG AACAAGGCCT GGATCGACAA CCGCACACGC
TGGCAGAACC TGTTTCTGGC GACCGTGCAA CAGCGTCAGG CGAGCGACTT CCCACAGCGC
ATCGCTGCCC TGCTACAGGA CCGCGAGACG TTCTGGACGC CTGAGTACCG CAAGGCCTAT
GACCAGACCG AGAAGGCTGC CATCTCATTG CTGGTAGACA TCACTGCCCA GAGCACGCCG
GAGCAACGAA CCCGCCTGCT GAGCCGCATC GCTGACATGC GCAAGGACTT CACCGACCTG
GATTGTCTGA AGTCGCAGCA GTGA
|
|---|
| Protein sequence | MPSLLKAFIT LLMTVSLLAG CNQVGLAYRN LDVIIPWTLS DYLDMNSEQK SWLDVRLKQH
LSWHCSTQLP EYLAWLDKLE DMVKNDRVTY EGLEARTSEA KDAIAKISRE ITPSAVELLS
RFDDKQVQEM QESFAKDQRK RENKYLDQPL ERQIAERADR MQKRLTPWIG KLNQVQKDRI
QAWSASLGEQ NKAWIDNRTR WQNLFLATVQ QRQASDFPQR IAALLQDRET FWTPEYRKAY
DQTEKAAISL LVDITAQSTP EQRTRLLSRI ADMRKDFTDL DCLKSQQ
|
|---|
| |