Gene PSPTO_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1583 
Symbol 
ID1183220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1743431 
End bp1744135 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content60% 
IMG OID637392955 
Producthypothetical protein 
Protein accessionNP_791408 
Protein GI28868789 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.906124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGAA GTCATCGTTT GTTTGAGCTG ATGCAAGCGC TTCGCCGACA TCGCAGGACG 
GTATCAGGCG CATCTCTTGC GCAGGAACTG GGCGTTTCGC TGCGCACCAT CCGTCGTGAT 
GTGGCGACCC TGCAAGGCAT GGGTGCTGAT ATCGATGGCG AGCCGGGCCT GGGTTACATT 
CTCAAGCCCG GTTTTCTGCT GCCTCCCTTG TCGTTCACGG AAGAAGAGCT ACAGGCGCTG 
ATGATCGGCG CACAGTGGGT CAGTCGCCAG ACCGACGACA AGTTCGCCTT CGCTGTAAGA 
AACGCCCTGG CCAAGATCAG CGCCGTTTTG CCTGTGGAGA TGCGCCCGAC ACTGGAGGAC 
GAAACGTTCT ACATCAGCAA GCCGCTCAGC GTTTCAACGA CCATCGACCT GAGCGAGATC 
CGCCGCGCGC TGCGCGACCA GTGCAAGTTG AGCATCACGC TTGCGATAGA GCATGCGCCC 
AAGGATGCGC AGATCATCTG GCCGATCATG CTCGGCTTCA TCGAAGCCAG GCGTCACCTG 
GCGGCTTGGT GTGAGGGCGA CAGTCAATAC CGGGTAATCG ACATGGATGA CATTGCAGAC 
GCGCACGTGC TGACTGAACG CTACACACGC AACCGCCGCC AGCTCATCAA GGAGTGGCGT 
GCACTGGAAG TTCTGCCCTG CAACGTCCGG GGCGAGACCT GCTGA
 
Protein sequence
MARSHRLFEL MQALRRHRRT VSGASLAQEL GVSLRTIRRD VATLQGMGAD IDGEPGLGYI 
LKPGFLLPPL SFTEEELQAL MIGAQWVSRQ TDDKFAFAVR NALAKISAVL PVEMRPTLED 
ETFYISKPLS VSTTIDLSEI RRALRDQCKL SITLAIEHAP KDAQIIWPIM LGFIEARRHL 
AAWCEGDSQY RVIDMDDIAD AHVLTERYTR NRRQLIKEWR ALEVLPCNVR GETC