| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1578 |
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| Symbol | |
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| ID | 1183215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1738236 |
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| End bp | 1739129 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392950 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_791403 |
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| Protein GI | 28868784 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.801813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAC CCAAACTCAA CGATCTGCAA GCCTTCCTGC TGGTTGCGCG GGAGCAGAGC
TTTACCAAGG CCGCCATCAA ACTGGGTATC ACGCCCTCGG CCCTGAGCCA CACAATGCGA
GCGCTTGAAG AGCGCATGGG CTTGCGCCTG CTGGCCAGAA CCACACGCAA CGTGGCCCCC
ACCGAAGCGG GCGAACAGTT GATGCGCTCG ATAGGGCCGC TGCTGGATCA GATCGCCGCA
GAAGTCGAAG TATTGGGCGA GCTGCGCGAC AAACCCGCTG GCACCATCCG CATCACCTGT
TCCGATGACG CCGCAGAAGG CATCCTTCGG CCCATGCTGG CGGGGTTTCT TGCGCAGTAC
CCGGATATCC AGATCGAAGT CTGCATCGAC TACGGCTTCA CCAACATTGT CAGCGAACGT
TTCGACGCGG GCATCCGCCT GGGTGAATCC ATCAGCAAGG ACATGATCGC CGTGCGTCTG
GGGCCGGACT GGCGCTTGTC AGTGGTCGGG GCGCCTGGCT ACTTCGAGAA CCATCCCGTG
CCGCTGCAAC CCCAGGACCT GACTCAGCAC ACCTGCATCA ACATCCGCCA TTCCCCGAAC
GGAAGTTGCT ATGCCTGGGA GTTCGAAAAA GACAGCCGCA AACTGAACAT CCGGGTCAAT
GGCCAGTTCA CGTCCAACAG CATGATCCAC GTCCTCAACG CCGCACTCGA CGGCGTGGGC
CTGGCCTACG TGCCAATTTC ACTGGCCCGA CCGCACCTCG AAAGCGGCCG TCTGAAAGAA
GTACTGGTGG ACTGGAGCCC GTACTTTGAA GGCTTTCATT TGTATTACCC GAACCGGCGT
CAGGCGTCGC CAGCGTTTAC AGCGTTTGTC GAGGCGGTGA GGTATCGTGG CTAG
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| Protein sequence | MSTPKLNDLQ AFLLVAREQS FTKAAIKLGI TPSALSHTMR ALEERMGLRL LARTTRNVAP
TEAGEQLMRS IGPLLDQIAA EVEVLGELRD KPAGTIRITC SDDAAEGILR PMLAGFLAQY
PDIQIEVCID YGFTNIVSER FDAGIRLGES ISKDMIAVRL GPDWRLSVVG APGYFENHPV
PLQPQDLTQH TCINIRHSPN GSCYAWEFEK DSRKLNIRVN GQFTSNSMIH VLNAALDGVG
LAYVPISLAR PHLESGRLKE VLVDWSPYFE GFHLYYPNRR QASPAFTAFV EAVRYRG
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