| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1577 |
|---|
| Symbol | |
|---|
| ID | 1183214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 1737114 |
|---|
| End bp | 1738226 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637392949 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_791402 |
|---|
| Protein GI | 28868783 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0247131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATTTAT CCATCGTTCA ACGCTGCGCG TCACGTCTCG GGTTGCAGGC CTTGTGGGTA
CTTGTCGGGT TGGCCTCGTC TACCCTAGCC AGTGCAGCCG TTGCGCCGGC GACCTATGGT
GAGATAGACG CTGCAGGCTT TGCGGGCGTG ACCAGGGACA GCTACACCTT GCAGGACTTT
TCTGATCGAT ACCGGGCCAC GCTGGAAATT TCCACCAAGG ACGACGTGTT TCGTCCTGGC
GTCATCAACG TTTACGACAA GGCCAGCGGC AAAGCCTTGA TCCGCGTACA GTCCGATGAG
CTGGTGCTCG ACACCGACCC TAAAACCGGT GAGGTCAAGA CCAATGTGCA CGAGTTGCCT
TACGGCGAGC AGAGCGTATT GATCTATCAG GATTTCAATT TCGATGGCAT CAAGGACCTG
GCCTTGATGG ACGGTCAGAA CAGCTGCTAT CACGGCCCCT CGTATCAGGT CTTTCTCGGC
ACGGCTGACG GTTTGCGGCA CAGCGATTCG TTTACCGAGC TGGCGCAAAG TAACTGCGGC
CTGTTCAGCG TGGATGAGAA AACCCGTACG GTCGAGACCA TGACCAAAAG CGGTTGCTGC
TGGCACCAGA TGTCTACTTA CGGCATCCAT AACGGTGAGC CGGTTCTGGA GACGCAAACA
GTCATTGAAC ACAACGGCGG GTCGGGGCTG CCGACTGAAA CGGTGGGTCG CAATCAGAAT
GGAAAAATGA CCTACACCAC CCGCATTGTC TGGGAAGAAG ACGAACAGCG TGAAACGCTC
TTGTCGTTCA GGCTTGCGCC GTCCGGCAAA CGGATTGTCC TGTTTCGCTC CGAGTTTGCG
GAGCCGGTTT ATTACGCTGC AGTGGACAGC AAGAATCTGG TCGGGCTGGT GTATCCCCAG
GCCGAAGGTG AGCAACTGAA GTACGACGAC GCCACTCACG CATTGAGCTT CGTGCGCGGC
GACACCACTT ACCGGATTGT GGGCGATGCG CAGGGCGCGC CAACCGGCAT GCAAGTGATT
GTTCGCGGCA AAACCACCGA ACTTAAACTG CTCGCCGAGC CTGCCGAAGG TTCGTTGAAC
AAGGTCGCAG AGGCTATAAA GGCTGCGCAG TAA
|
|---|
| Protein sequence | MHLSIVQRCA SRLGLQALWV LVGLASSTLA SAAVAPATYG EIDAAGFAGV TRDSYTLQDF
SDRYRATLEI STKDDVFRPG VINVYDKASG KALIRVQSDE LVLDTDPKTG EVKTNVHELP
YGEQSVLIYQ DFNFDGIKDL ALMDGQNSCY HGPSYQVFLG TADGLRHSDS FTELAQSNCG
LFSVDEKTRT VETMTKSGCC WHQMSTYGIH NGEPVLETQT VIEHNGGSGL PTETVGRNQN
GKMTYTTRIV WEEDEQRETL LSFRLAPSGK RIVLFRSEFA EPVYYAAVDS KNLVGLVYPQ
AEGEQLKYDD ATHALSFVRG DTTYRIVGDA QGAPTGMQVI VRGKTTELKL LAEPAEGSLN
KVAEAIKAAQ
|
|---|
| |