| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1546 |
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| Symbol | lpxA |
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| ID | 1183183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1705730 |
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| End bp | 1706506 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392918 |
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| Product | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase |
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| Protein accession | NP_791371 |
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| Protein GI | 28868752 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase |
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| TIGRFAM ID | [TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGA TTGACCCTCG CGCAATCATC GATCCGACGG CCATTCTGGC CGACAGCGTT
GAGGTCGGCC CTTGGTCGAT CATCGGACCC GGTGTGGAAA TTGGCGAGGG TACAGTTGTC
GGTCCTCATG TTGTCCTCAG GGGGCCAACG AAGATCGGCA AGCATAATCG CATCTACCAG
TTTTCATCGG TGGGCGAGGA CACGCCTGAT CTCAAGTACA AGGGTGAGGA AACCCGTCTT
GTCATCGGCG ATCACAATGT GATTCGCGAA GGCGTGACCA TTCACCGCGG GACCGTTCAG
GACCGTGCCG AGACGACGCT GGGCGATCAC AACCTGATCA TGGCCTATGC GCACATCGGC
CACGACAGTG TGATCGGCAA CCACGTGATA TTGGTCAACA ACACCGCGCT GGCAGGCCAT
GTCCACGTGG ATGACTGGGC CATTCTGTCC GGTTTTACCC TGGTGCATCA GTTCTGCCAC
ATCGGCGCGC ACAGTTTCTC CGGCATGGGC ACGGCCATCG GCAAGGACGT TCCGGCGTTC
GTGACGGTGT TCGGTAACCC GGCCGAGGCG CGCAGCATGA ATTTCGAAGG CATGCGCCGT
CGTGGTTTCT CCGAAGAAGC CATTCATGCC CTGCGCCGGG CCTACAAGAC CGTCTATCGC
CAGGGGCTGA CCATCGCTCA GGCACTGTCT GATCTGGCTG AGCCTGCGGC GCAGTTTCCT
GAAGTCGCAG TGTTTCTGCA GTCCATTCAG ACGTCGACTC GCGGCATCAT TCGCTAA
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| Protein sequence | MSLIDPRAII DPTAILADSV EVGPWSIIGP GVEIGEGTVV GPHVVLRGPT KIGKHNRIYQ
FSSVGEDTPD LKYKGEETRL VIGDHNVIRE GVTIHRGTVQ DRAETTLGDH NLIMAYAHIG
HDSVIGNHVI LVNNTALAGH VHVDDWAILS GFTLVHQFCH IGAHSFSGMG TAIGKDVPAF
VTVFGNPAEA RSMNFEGMRR RGFSEEAIHA LRRAYKTVYR QGLTIAQALS DLAEPAAQFP
EVAVFLQSIQ TSTRGIIR
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