Gene PSPTO_1545 details

Gene Information

• Locus tag: PSPTO_1545
• Symbol: fabZ
• ID: 1183182
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1705293
• End bp: 1705733
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637392917
• Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
• Protein accession: NP_791370
• Protein GI: 28868751
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
• TIGRFAM ID: [TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGACA TCAACGAAAT TCGCGAATAC CTGCCTCATC GTTACCCGTT CCTGCTGGTG 
GACCGCGTGA CCGAGCTGGA TATCGAGAAC AAGAACATTC GCGCCTACAA GAATGTCAGC 
GTCAACGAGC CTTTCTTCAA CGGTCACTTC CCCCAGCATC CAATCATGCC GGGCGTTCTG 
ATCATTGAGG CCATGGCTCA GGCTGCGGGT ATTCTTGCGT TCAAGATGCT CGACTCCAAG 
CCATCCGACG GCACGCTCTA TTATTTCGTA GGTTCGGACA AGCTGCGCTT CCGCCAACCG 
GTTTTTCCGG GTGACAAACT GGTTCTTGAA GCAACGTTTC TGAGCAGCAA ACGCCAGATC 
TGGAAGTTTG AGTGCAAGGC CACCGTTGAT GGTAAAGCGG TATGCTCTGC CGAAATCATC 
TGTGCGGAAC GCAAGCTATG A 

 

Protein sequence

MMDINEIREY LPHRYPFLLV DRVTELDIEN KNIRAYKNVS VNEPFFNGHF PQHPIMPGVL 
IIEAMAQAAG ILAFKMLDSK PSDGTLYYFV GSDKLRFRQP VFPGDKLVLE ATFLSSKRQI 
WKFECKATVD GKAVCSAEII CAERKL