| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1542 |
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| Symbol | |
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| ID | 1183179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1701189 |
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| End bp | 1703576 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637392914 |
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| Product | outer membrane protein |
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| Protein accession | NP_791367 |
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| Protein GI | 28868748 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGTC TGCTGCTAAC TGCGGTTCTT TCCGCACTGA TGATCGCTGA AGTTCACGCC
GAGTCCTTCA CCATCTCCGA TATCCGCGTC AACGGCCTGC AGCGGGTTTC CGCCGGCAGT
GTCTTTGGTG CGTTGCCGCT GAACGTAGGC GAGCAGGCGG ATGACGGTCG TCTGGTCGAT
GCTACCCGTT CGTTGTTCAA AACCGGTTTC TTTCAAGATA TCCAGCTGGG TCGCGATGGC
AACGTACTCG TCATCAACGT CGTCGAACGC CCGTCGGTTG CGAGTATCGA AATCGAGGGC
AACAAGGCCA TCTCCACTGA AGACCTGATG AAAGGGCTGA AACAGTCCGG TCTGGCTGAA
GGTGAAATTT TCCAGCGTGC GACCCTCGAA GGCGTGCGTA ACGAGCTGCA ACGTCAATAC
GTTGCCCAGG GTCGTTACTC CGCCGAGGTC GACGCCGAGG TTGTTCCTCA GCCACGCAAC
CGTGTGGGCC TGAAGATCAA CATCAATGAA GGCACCGTTG CCTCCATCCA GCATATTAAC
GTGGTGGGCA ACACGGTCTT TTCCGATGAA GACCTGACCG ACCTGTTCGA GCTGAAGACC
AGCAACTGGC TGTCGTTCTT CAAGAACGAC GACAAGTACG CCCGTGAGAA ACTCTCGGGT
GACCTTGAAC GTCTGCGTTC GTACTACCTT GATCGCGGCT ATATCAACAT GGATATCGCC
TCGACCCAGG TGTCGATCAC GCCTGACAAG AAGAACGTGT ACATCACGGT CAACGTCAAC
GAAGGCGAAA AATACAGCGT CAAGTCGGTC AAGCTGAGCG GCGACCTCAA GGTGCCGGAA
GATCAGGTCA AATCCCTGTT GCTGGTGCAG CCGGGCCAGG TGTTCTCGCG CAAGGTCATG
ACCACGACTT CCGAGCTGAT CACCCGTCGT CTGGGTAACG AAGGCTATAC CTTCGCCAAC
GTCAACGGCG TGCCGACCCC GAACAACGAA GATCACACTG TCGATATCAC CTTCGTGGTC
GATCCCGGCA AGCGTGCTTA CGTCAACCGC ATCAACTACC GTGGCAACAC CAAGTCGGAA
GACGAAGTGC TGCGCCGCGA AATGCGTCAG ATGGAAGGCG GCTGGGCCTC TACCTACCTG
ATCGACCAGT CGAAAACCCG TCTGGACCGT CTGGGCTTCT TCAAGGAAGT CAACGTCGAA
ACGCCACCTG TACCAGGCAC CGACGACCAG GTTGACGTGA ATTACGCAGT AGAAGAGCAG
GCTTCCGGCT CGATCACTGC AAGCGTCGGC TTCGCGCAAA GCGCCGGTCT GATCCTGGGA
GGTTCGATCA GCCAGAACAA CTTCCTCGGC ACCGGTAACA AGGTCAGCAT CGGCCTGACC
CGCAGTGAAT ACCAGAGCCG TTACAACTTC AGCTACGTCG ATCCGTACTA CACGCCGGAC
GGTGTCAGCC TTGGTTATAG CGCGTTCTAC CGCACCACCA ACTACGATGA CCTCGACGTT
GATGTCGCAA GCTACGCAGT AGACAGCCTG GGTGCCGGTA TCAACCTCGG CTACCCGATC
AGCGAAACCT CGCGCCTGAC CTACGGCCTG ACCGTGCAGC AGGATGAGAT CAAGACCGGC
CGTTACACTG TCGATGAAAT CTTTGATTTC GTACAAAAAG AAGGCGACAA GTACCTGAAC
TTCAAAGGCT CGATTGGCTG GTCTGAATCG ACTCTGAACA AAGGCGTATT GGCCACCCGT
GGTCACTCGC AAAGCCTGGT GTTCGAATCC ACCTTGCCGG GCAGCGACCT GTCGTTCTTC
AAGCTGGATT ACCGTGCTCA GTACTTCCAC CCGATCACCG ATAACTACAC CCTGCGTCTG
CACACCGAGC TGGGTTATGG CGACGGATAC GGTTCGACCT CGGGTCTGCC GTTCTACGAG
AACTACTATG CCGGTGGTTT CAACTCGGTT CGTGGTTTCA AGGACAGCAC GCTTGGTCCA
CGTAGTACGC CAAGCCGTGG TGTGGCTGTA ACGGGGAATC AAGGCACTGA TCCGGACCCT
GATCAGGATC CACTGCCGTT CGGCGGCAAC GCCCTGGTAC AAGGTGGCGT AGAAGTCATG
TTCCCGCTGC CGTTCATCAA GGACCAGCGT TCCCTGCGCA CCTCCGTGTT CTGGGATGTC
GGTAACGTAT TTGATACCAA CTGTGACTCC ACCCGGACGA CGGCCAGCGG CAAGAAAGTC
GAGTGCAACA ACATCGACCT GTCCGGCATG GCCAGCTCTG TGGGTATCGG CGTTACCTGG
ATCACTGCGC TCGGCCCTCT GAGCTTCGCT TTGGCGATGC CGATCAAGAA GCCGGACGAC
GAAGCAGAAA CCCAGGTCTT CCAATTCTCC CTGGGTCAGA CTTTCTAA
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| Protein sequence | MKRLLLTAVL SALMIAEVHA ESFTISDIRV NGLQRVSAGS VFGALPLNVG EQADDGRLVD
ATRSLFKTGF FQDIQLGRDG NVLVINVVER PSVASIEIEG NKAISTEDLM KGLKQSGLAE
GEIFQRATLE GVRNELQRQY VAQGRYSAEV DAEVVPQPRN RVGLKININE GTVASIQHIN
VVGNTVFSDE DLTDLFELKT SNWLSFFKND DKYAREKLSG DLERLRSYYL DRGYINMDIA
STQVSITPDK KNVYITVNVN EGEKYSVKSV KLSGDLKVPE DQVKSLLLVQ PGQVFSRKVM
TTTSELITRR LGNEGYTFAN VNGVPTPNNE DHTVDITFVV DPGKRAYVNR INYRGNTKSE
DEVLRREMRQ MEGGWASTYL IDQSKTRLDR LGFFKEVNVE TPPVPGTDDQ VDVNYAVEEQ
ASGSITASVG FAQSAGLILG GSISQNNFLG TGNKVSIGLT RSEYQSRYNF SYVDPYYTPD
GVSLGYSAFY RTTNYDDLDV DVASYAVDSL GAGINLGYPI SETSRLTYGL TVQQDEIKTG
RYTVDEIFDF VQKEGDKYLN FKGSIGWSES TLNKGVLATR GHSQSLVFES TLPGSDLSFF
KLDYRAQYFH PITDNYTLRL HTELGYGDGY GSTSGLPFYE NYYAGGFNSV RGFKDSTLGP
RSTPSRGVAV TGNQGTDPDP DQDPLPFGGN ALVQGGVEVM FPLPFIKDQR SLRTSVFWDV
GNVFDTNCDS TRTTASGKKV ECNNIDLSGM ASSVGIGVTW ITALGPLSFA LAMPIKKPDD
EAETQVFQFS LGQTF
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