| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1539 |
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| Symbol | cdsA-1 |
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| ID | 1183176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1697629 |
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| End bp | 1698444 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392911 |
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| Product | phosphatidate cytidylyltransferase |
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| Protein accession | NP_791364 |
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| Protein GI | 28868745 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0575] CDP-diglyceride synthetase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGAAAC AACGGATCAT CACGGCACTC ATTCTGTTGC CGATTGCCCT GTGTGGCTTT
TTCCTGCTGA CCGGCATGTA CTTTGCTCTT TTTATCGGCG TAGTGGTCGT ACTGGGTGCC
TGGGAATGGG CGCGGTTGGC GGGCTTTGCT GCCCAGTCGA TGCGTGTGGG GTACGCGGCC
CTGGTCGCTG TGCTGCTGTT TTTCATGTAC CTGCTGCCGG GTCTTGAACC CTGGGTACTG
GTCGCGGCGG TCATCTGGTG GAGCGTTGCG ACCTTCCTTG TTCTGACTTA TCCCGATTCC
AGCAGTCACT GGGCCAGTGC TGCCTGCAAG CTGGTGATCG GTCTGCTGAT CCTGCTGCCC
GCGTGGCAGG GGCTGGTGCT CATCAAGCAA TGGCCGCTGG GCAACTGGCT GATCCTGTCG
GTGATGGTGC TGGTGTGGGC GGCTGACATC GGCGCGTATT TCTCCGGCAA GGCTTTCGGC
AGGCGCAAGC TGGCTCCCAA GGTCAGTCCC GGTAAAAGCT GGGAGGGCGT ATACGGCGGT
CTGGTGGTCA GTCTGGGTAT CACCGCGGCA GTCGGTGTTT GGCGTGACTG GACTGTCGTT
CAGTTCATCG CCGCACTGTT GGGTGCCGCT GTGATCGTGT TCATTTCCGT GATCGGTGAC
CTCACCGAAA GCATGTTCAA GCGCCAGTCC GGGGTCAAGG ACAGCAGTAA TCTGCTGCCT
GGGCACGGCG GCGTTCTGGA CCGCATCGAC AGCCTGACGG CCGCCATTCC GGTATTTGCC
GTGCTGTTGT GGGCCGCTGA CTGGGGTGTC ATGTGA
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| Protein sequence | MLKQRIITAL ILLPIALCGF FLLTGMYFAL FIGVVVVLGA WEWARLAGFA AQSMRVGYAA
LVAVLLFFMY LLPGLEPWVL VAAVIWWSVA TFLVLTYPDS SSHWASAACK LVIGLLILLP
AWQGLVLIKQ WPLGNWLILS VMVLVWAADI GAYFSGKAFG RRKLAPKVSP GKSWEGVYGG
LVVSLGITAA VGVWRDWTVV QFIAALLGAA VIVFISVIGD LTESMFKRQS GVKDSSNLLP
GHGGVLDRID SLTAAIPVFA VLLWAADWGV M
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