| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1533 |
|---|
| Symbol | map-1 |
|---|
| ID | 1183170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 1692462 |
|---|
| End bp | 1693244 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637392905 |
|---|
| Product | methionine aminopeptidase, type I |
|---|
| Protein accession | NP_791358 |
|---|
| Protein GI | 28868739 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0024] Methionine aminopeptidase |
|---|
| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCA CCCTCAAAAC CCCGGAAGAC ATTGAAAAGA TGCGCATCGC CGGCCGTCTG
GCCGCCGAAG TTCTGGAAAT GATCGCCCCC CATGTCAAGC CGGGCGTCAC CACCGAAGAG
CTGGACCGCA TCTGCCACGA CTACATCGTC AACGAGCAGC AGGCGATCCC GGCTCCGCTG
AACTACAAAG GCTTTCCCAA GTCGATCTGC ACCTCGATCA ATCAGGTGGT CTGCCACGGC
ATCCCCGGCG ACAGGAAGCT CAAGGACGGT GACTCGCTGA ACATTGACGT CACAGTCATC
AAGGACGGTT ACCACGGCGA CACCAGCAAA ATGTTTCACG TCGGCACCGT CCCGGTGTGG
GCCGAACGCC TGTCGAAAGT GACCCAGGAA TGCCTGTACA AGGCCATCGA GATCGTCAAA
CCCGGCACCC ATCTGGGCGA CATCGGTGCG GTCATTCAGA AACACGCTGA AAAGAATGGT
TTCTCTGTGG TTCGCGAGTT CTGCGGGCAC GGCATCGGCA AAGTGTTTCA CGAAGAGCCG
CAAGTCATGC ATTTCGGCGA GGCGGGCACC GGCCTTCAGC TCAAGGAAGG CATGACCTTC
ACCATCGAGC CGATGATCAA CCAAGGCCGC GCGGAAACCA AGATCCTGGG TGACGGCTGG
ACCGCGATCA CCAAGGACCG CAAGCTCTCG GCGCAGTGGG AACACACGCT GCTGGTGACG
GCCGACGGTT ACGAAATCTT CACTTTACGC AGCGACGATA CCATTGCACA AAAGGCTCCC
TGA
|
|---|
| Protein sequence | MTITLKTPED IEKMRIAGRL AAEVLEMIAP HVKPGVTTEE LDRICHDYIV NEQQAIPAPL
NYKGFPKSIC TSINQVVCHG IPGDRKLKDG DSLNIDVTVI KDGYHGDTSK MFHVGTVPVW
AERLSKVTQE CLYKAIEIVK PGTHLGDIGA VIQKHAEKNG FSVVREFCGH GIGKVFHEEP
QVMHFGEAGT GLQLKEGMTF TIEPMINQGR AETKILGDGW TAITKDRKLS AQWEHTLLVT
ADGYEIFTLR SDDTIAQKAP
|
|---|
| |