| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1532 |
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| Symbol | glnD |
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| ID | 1183169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1689699 |
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| End bp | 1692395 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392904 |
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| Product | [protein-pII] uridylyltransferase |
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| Protein accession | NP_791357 |
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| Protein GI | 28868738 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
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| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCAAG TAGATCCAGA CCTGTTCGAT CGCGGCCAGT TTCAGGCCGA ACTGGCCTTG
AAGGCCAGCC CCATCGCTGC GTTCAAGAAA GCGATCCGCA GAGCAAGAGA CGTCCTCGAT
AACCGGTTCA GGTCGGGCCG TGACATCCGC CGCCTGATCG AGGATCGTGC CTGGTTCGTG
GACAACATCC TGCAACAGGC CTGGGATCAG TTCGAATGGA GCGAAGACGC CGACATCGCC
CTGCTGGCAG TCGGCGGCTA CGGTCGCGGC GAGCTGCACC CGTACTCGGA CATCGACCTG
CTGATTTTGC TGGAAAGCGA TGATCACGAA GTTTTCCGCG AACCTATCGA GCGTTTTCTG
ACGCTGCTGT GGGATATCGG CCTGGAAGTG GGACAAAGCG TACGCTCCGT CGATGAGTGC
GCGCAGGAAG GCCGAGCCGA TCTGACGGTG ATCACCAACC TGATGGAAAG CCGCACCATC
GCCGGCCCCG AGCATCTGCG TCAGCGCATG CTGGAAGTCA CCAGCACGCA GCACATGTGG
CCGAGCAAGG AATTTTTCCT GGCCAAGCAC GCAGAGCAGA AAAAGCGTCA CCACAAGTAC
AACGACACCG AGTACAACCT CGAACCCAAC GTCAAAGGCT CGCCCGGTGG CCTGCGCGAT
ATTCAGACCA TTCTCTGGGT GGCGCGGCGC CAGTACGGCA CCCTCAACCT GCACGCGCTG
GCAGGCGAAG GCTTTCTGCT GGGCAGCGAA AACGCACTGC TGGCCTCCTC TCAGGAGTTT
CTCTGGAAAG TGCGCTACGC CCTGCACATG CTGGCCGGAC GATCCGAAGA CCGGTTGTTG
TTCGATTATC AGGTTCGCAT CGCCGGGCTG CTGGGCTATG AAGACAACGA TGCCAAACTG
GCCATCGAGC GCTTCATGCA GAAGTACTAC CGCGTGGTCA TGAGCATCGC GGAGCTGAGC
GATCTGATCA TTCAGCATTT TGAAGAAGTG ATTCTCTCCG ACGACGACGG CACCCCCCAG
CCGATCAACT CGCGCTTCCA GTTGCACGAC GGCTATATAG AAGCAACGAA CCCGAACGTC
TTCAGGCGCA CGCCGTTCGC CATGCTCGAG ATCTTCGTGC TGATGGCCCA GCACCCGGAG
ATAAAGGGCG TGCGTGCCGA CACGATTCGG CTGCTGCGTG AGCACCGGCA CCTGATCAAC
GATGACTTTC GCAACGATAT TCGCAACACC AGCCTGTTCA TCGAGCTGTT CAAGTGCGAA
ATCGGTATCC ATCGCAACCT GCGCCGCATG AACCGCTATG GCATTCTCGG CCTGTACCTG
CCGGAGTTCG GCCACATCGT CGGGCAGATG CAGCATGACC TGTTCCACAT CTATACCGTC
GATGCGCACA CGCTGAATCT CATCAAGCAC CTGCGCAAGC TGCAGTACAC CGAGGTCTCC
GAGAAATTCC CACTGGCCAG CAAAATCATG GCCCGCCTGC CGAAACCGGA ATTAATCTAT
CTGGCCGGGC TGTACCACGA CATCGGCAAG GGCCGTGGCG GCGACCACTC GGAGCTTGGT
GCCGTCGACG CACAGGCCTT TGGCACGCGC CATCACCTGC CAGCCTGGGA CAACCGGCTT
ATCGTCTGGC TGGTGAGCAA CCACCTGGTG ATGTCCACGA CCGCGCAGCG CAAGGACCTT
TCCGATCCGC AGGTCATCCA CGATTTCGCC CAGTTCGTGG GCGATGAAGT ACATCTGGAC
TACCTGTATG TGCTGACCGT CGCCGACATC AACGCGACCA ACCCGACCCT CTGGAATTCA
TGGCGCGCCA GCCTGTTGCG CCAGTTGTAC ACCGAGACCA AGCGCGCCTT GCGTCGCGGC
CTCGAAAACC CGGTTGACCG TGAAGAGCAG ATTCGCCGTA CCCAGACTGC CGCGCTGGAC
ATTCTGGTGC GCAGCGGTAC CGACCCTGAT GACGTCGAGC AACTCTGGTC AGCGTTGGGC
GATGACTACT TTCTGCGCCA CACCGCCGGC GATGTGGCCT GGCACAGTGA CGCGATCCTG
CAGCAGCCTG CCGATGGCGG CCCGCTGGTG CTGATCAAGG AAACCACGCA GCGTGAATTC
GAGGGCGGCA CCCAGATATT CATCTATGCG CCGGACCAGC ACGACTTCTT CGCCGTGACC
GTGGCCGCGA TGGACCAACT GAACCTGAAC ATTCATGACG CGCGCATCAT CACGTCCAGC
AGCCAGTTCA CACTCGACAC CTACATCGTA CTGGATCACG AGGGCGGCTC GATCGGCAAC
AATCCGGAAC GCATTCAGGA CATCCGCGAC GGCCTGACCG AAGCGCTGCG CAACCCGGAC
GATTACCCGA CGATCATCAA GCGTCGCGTG CCCCGCCAGC TCAAGCACTT TGCCTTCGCT
CCGCAGGTCA CCATTCACAA CGACGCCCAG CGCCCGGTAA CGGTGCTCGA ACTGCTGGCA
CCCGACCGGC CGGGCCTGCT GGCACGCATT GGCAAGATTT TCCTGGAGTT CGACCTGTCA
TTGCAGAACG CCAAGATTGC AACCTTGGGC GAACGTGTGG AAGACGTTTT CTTCATCACC
GACGCCAACA ATCAGCCGCT GTCCGATCCG CAATTGTGCA GCCAGCTGCA GGAGGCCATC
GTCAAGCAAC TGAGCGTCAA CTCAGAGCCC GGCGGCGACC TGCGGATCAG CATATGA
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| Protein sequence | MPQVDPDLFD RGQFQAELAL KASPIAAFKK AIRRARDVLD NRFRSGRDIR RLIEDRAWFV
DNILQQAWDQ FEWSEDADIA LLAVGGYGRG ELHPYSDIDL LILLESDDHE VFREPIERFL
TLLWDIGLEV GQSVRSVDEC AQEGRADLTV ITNLMESRTI AGPEHLRQRM LEVTSTQHMW
PSKEFFLAKH AEQKKRHHKY NDTEYNLEPN VKGSPGGLRD IQTILWVARR QYGTLNLHAL
AGEGFLLGSE NALLASSQEF LWKVRYALHM LAGRSEDRLL FDYQVRIAGL LGYEDNDAKL
AIERFMQKYY RVVMSIAELS DLIIQHFEEV ILSDDDGTPQ PINSRFQLHD GYIEATNPNV
FRRTPFAMLE IFVLMAQHPE IKGVRADTIR LLREHRHLIN DDFRNDIRNT SLFIELFKCE
IGIHRNLRRM NRYGILGLYL PEFGHIVGQM QHDLFHIYTV DAHTLNLIKH LRKLQYTEVS
EKFPLASKIM ARLPKPELIY LAGLYHDIGK GRGGDHSELG AVDAQAFGTR HHLPAWDNRL
IVWLVSNHLV MSTTAQRKDL SDPQVIHDFA QFVGDEVHLD YLYVLTVADI NATNPTLWNS
WRASLLRQLY TETKRALRRG LENPVDREEQ IRRTQTAALD ILVRSGTDPD DVEQLWSALG
DDYFLRHTAG DVAWHSDAIL QQPADGGPLV LIKETTQREF EGGTQIFIYA PDQHDFFAVT
VAAMDQLNLN IHDARIITSS SQFTLDTYIV LDHEGGSIGN NPERIQDIRD GLTEALRNPD
DYPTIIKRRV PRQLKHFAFA PQVTIHNDAQ RPVTVLELLA PDRPGLLARI GKIFLEFDLS
LQNAKIATLG ERVEDVFFIT DANNQPLSDP QLCSQLQEAI VKQLSVNSEP GGDLRISI
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