| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1531 |
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| Symbol | |
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| ID | 1183168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1688403 |
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| End bp | 1689596 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392903 |
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| Product | aminotransferase, classes I and II |
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| Protein accession | NP_791356 |
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| Protein GI | 28868737 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACG CCATGCAACT GCTTCAGCCC TACCCTTTCA AGAAGCTGCG CGCTTTGCTG
GGAAGCGTAA CGCCCAACCC CGAAAAACGC CCGGTGGCGC TGTCCATTGG CGAGCCGAAG
CATCGCTCAC CCGATTTCGT TGCCAAGGCT CTGGCAGACA ACCTTGATCA GATGGCGGTT
TACCCCACCA CACTGGGTAT ACCCGCGCTG CGCGAGGCCA TTGCCGGCTG GTGCAACCGT
CGATTCGGCG TGCCGCAGGG CTGGATCGAT CCGGCGCGCA ACGTATTACC GGTCAACGGG
ACACGCGAAG CCCTGTTCGC CTTTACCCAG ACAGTCGTCA ATCGTAGCGA TGACGGCCTG
GTGGTCAGCC CGAACCCGTT CTATCAGATC TACGAAGGCG CGGCTTTTCT GGCAGGTGCT
CAACCGCACT ATCTGCCATG CCTGAGCGAC AATGGCTTCA ACCCTGATTT CGATGCAGTC
GACGCGGACA TCTGGAAGCG CTGCCAGATC CTGTTTCTGT GCTCGCCGGG CAACCCGACC
GGCGCGCTGA TCCCGGTTGA AACCCTGAAA AAACTCATCG CGCTGGCTGA CGAACACGAC
TTCGTCATTG CCGCAGACGA GTGCTACAGC GAACTGTACT TCGACGAACA GACCCCGCCG
CCGGGCCTGC TCAGCGCCTG CGTCGAACTG GGTCGCCAGG ACTTCAAGCG CTGCGTGGTG
TTCCACAGCC TGTCCAAGCG CTCCAACCTG CCGGGCCTGC GTTCGGGGTT TGTGGCGGGC
GACGCAGAGA TCCTCAAGGC CTTCTTGCTG TATCGCACTT ACCACGGCTG CGCAATGCCG
GTGCAAACCC AACTGGCCAG CATCGCCGCC TGGAATGACG AAGAGCATGT TCGCGCCAAT
CGTGACCTGT ATCGCGAGAA ATTCGATGCC GTGCTCGACA TCCTCGCCCC GGTGCTGGAT
GTACAACGCC CGGACGGTGG CTTCTACCTG TGGCCGAATG TCGGCACCGA TGACGCTGCA
TTCTGTCGCG ACCTGTTCGT CGATCAGCAT GTCACCGCAG TGCCGGGCTC GTACCTTTCG
CGGGAAGTCG ACGGCGTCAA CCCGGGCGCT GGCCGAGTGC GTCTGGCGCT GGTAGCGCCG
CTGGCCGAGT GTATCGAGGC TGCCGAACGC ATCCGCGCAT TCGTGCTCAA GTAA
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| Protein sequence | MNNAMQLLQP YPFKKLRALL GSVTPNPEKR PVALSIGEPK HRSPDFVAKA LADNLDQMAV
YPTTLGIPAL REAIAGWCNR RFGVPQGWID PARNVLPVNG TREALFAFTQ TVVNRSDDGL
VVSPNPFYQI YEGAAFLAGA QPHYLPCLSD NGFNPDFDAV DADIWKRCQI LFLCSPGNPT
GALIPVETLK KLIALADEHD FVIAADECYS ELYFDEQTPP PGLLSACVEL GRQDFKRCVV
FHSLSKRSNL PGLRSGFVAG DAEILKAFLL YRTYHGCAMP VQTQLASIAA WNDEEHVRAN
RDLYREKFDA VLDILAPVLD VQRPDGGFYL WPNVGTDDAA FCRDLFVDQH VTAVPGSYLS
REVDGVNPGA GRVRLALVAP LAECIEAAER IRAFVLK
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