Gene PSPTO_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1515 
Symbol 
ID1183152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1672410 
End bp1673273 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID637392887 
Producthypothetical protein 
Protein accessionNP_791340 
Protein GI28868721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTATCG GCAGATTTTG CCGATCATTA ACAATTTTTG AGTGTGTAGA CGTAATGATC 
GAGCAGCAAG CAGGCAGTCG TATCCGGGTT GAAGCGCTGG CAATCGACGG GCAGGAACAC
GCCGCGCAAT GGGCACAGCG TCTGGGCTTG CCGTTGCATG ATGCCGACGC GGATTTTGCA
CTGCAATTGA CCGACGATGG CCTGCAATTG CAGCAATTGG GCGACGACGT GCCGGGCGCG
GTGCGGGTCG ACTTTGTCGA AGGCGCGGTC GCCCATCGGC GGTTGTTTGG CGGCGGCACC
GGGCAGATGA TTGCCAAGGC GGTTGGCATT CAGCCAGGTA TTCGCCCCAG CGTGCTGGAT
GCCACGGCAG GTCTGGGCAA GGATGCCTTC GTGCTGGCGA GCCTTGGCTG CGAGATGAGC
CTGATCGAGC GCCAGCCGAT CATCGCCGCG CTGCTTGAGG ATGGCCTGGC GCGTGGGCGC
GGCGACCGTG ATATCGGCCC GATCATCGCC CGGATGCGCC TGTTGACCGG CAACTCCATC
GAGATCATTC GAAGCTGGGT AGAAGAGCCG CCGCAGGTCA TCTACCTTGA CCCGATGTTT
CCGCATCGGG AAAAGACCGC ACTGGTGAAG AAGGAAATGC GCCTGTTCCG GCCGTTGGTG
GGCGATGACA TGGACGCGCC AGCGTTGCTC GCGGCGGCGC TGGCGCTTGC CACCCATCGC
GTGGTGGTCA AACGACCGCG CAAGGCGCCG TGTATCGACG GCCCCAAGCC GGGTTACGCG
CTGGACGGCA AGTCCAGCCG TTATGACATC TATCCCAGAA AAGCCCTGAA GCCCAAGGCT
GTCGAGCCAG CGCCGGACCT GTAG
 
Protein sequence
MVIGRFCRSL TIFECVDVMI EQQAGSRIRV EALAIDGQEH AAQWAQRLGL PLHDADADFA 
LQLTDDGLQL QQLGDDVPGA VRVDFVEGAV AHRRLFGGGT GQMIAKAVGI QPGIRPSVLD
ATAGLGKDAF VLASLGCEMS LIERQPIIAA LLEDGLARGR GDRDIGPIIA RMRLLTGNSI
EIIRSWVEEP PQVIYLDPMF PHREKTALVK KEMRLFRPLV GDDMDAPALL AAALALATHR
VVVKRPRKAP CIDGPKPGYA LDGKSSRYDI YPRKALKPKA VEPAPDL