Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1515 |
Symbol | |
ID | 1183152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1672410 |
End bp | 1673273 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392887 |
Product | hypothetical protein |
Protein accession | NP_791340 |
Protein GI | 28868721 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTATCG GCAGATTTTG CCGATCATTA ACAATTTTTG AGTGTGTAGA CGTAATGATC GAGCAGCAAG CAGGCAGTCG TATCCGGGTT GAAGCGCTGG CAATCGACGG GCAGGAACAC GCCGCGCAAT GGGCACAGCG TCTGGGCTTG CCGTTGCATG ATGCCGACGC GGATTTTGCA CTGCAATTGA CCGACGATGG CCTGCAATTG CAGCAATTGG GCGACGACGT GCCGGGCGCG GTGCGGGTCG ACTTTGTCGA AGGCGCGGTC GCCCATCGGC GGTTGTTTGG CGGCGGCACC GGGCAGATGA TTGCCAAGGC GGTTGGCATT CAGCCAGGTA TTCGCCCCAG CGTGCTGGAT GCCACGGCAG GTCTGGGCAA GGATGCCTTC GTGCTGGCGA GCCTTGGCTG CGAGATGAGC CTGATCGAGC GCCAGCCGAT CATCGCCGCG CTGCTTGAGG ATGGCCTGGC GCGTGGGCGC GGCGACCGTG ATATCGGCCC GATCATCGCC CGGATGCGCC TGTTGACCGG CAACTCCATC GAGATCATTC GAAGCTGGGT AGAAGAGCCG CCGCAGGTCA TCTACCTTGA CCCGATGTTT CCGCATCGGG AAAAGACCGC ACTGGTGAAG AAGGAAATGC GCCTGTTCCG GCCGTTGGTG GGCGATGACA TGGACGCGCC AGCGTTGCTC GCGGCGGCGC TGGCGCTTGC CACCCATCGC GTGGTGGTCA AACGACCGCG CAAGGCGCCG TGTATCGACG GCCCCAAGCC GGGTTACGCG CTGGACGGCA AGTCCAGCCG TTATGACATC TATCCCAGAA AAGCCCTGAA GCCCAAGGCT GTCGAGCCAG CGCCGGACCT GTAG
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Protein sequence | MVIGRFCRSL TIFECVDVMI EQQAGSRIRV EALAIDGQEH AAQWAQRLGL PLHDADADFA LQLTDDGLQL QQLGDDVPGA VRVDFVEGAV AHRRLFGGGT GQMIAKAVGI QPGIRPSVLD ATAGLGKDAF VLASLGCEMS LIERQPIIAA LLEDGLARGR GDRDIGPIIA RMRLLTGNSI EIIRSWVEEP PQVIYLDPMF PHREKTALVK KEMRLFRPLV GDDMDAPALL AAALALATHR VVVKRPRKAP CIDGPKPGYA LDGKSSRYDI YPRKALKPKA VEPAPDL
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