Gene PSPTO_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1512 
Symbol 
ID1183149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1669952 
End bp1670821 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content59% 
IMG OID637392884 
Producthypothetical protein 
Protein accessionNP_791337 
Protein GI28868718 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGTGA CTCGCCTGCC TTACTACCTC GGTTGTCCGT CATGGAGTGA AAACGCCTGG 
CGCGATTCGT TGTACCCCGA AGATGCCCGT CCCACTGATT TTCTGAGCCT CTACACGCAA
GTGTTCAACG TCGTTGAAGG CAACACCACC TTCTATGCAC GGCCCGCTGC CACTACTGTT
CAGCGTTGGG CAGAAACAAT GCCCGAAGAC TTTCGCTTCA CGGCCAAATT CCATAAAGAC
ATCAGCCACA ACGGCGACCT TCGTCAACAG GTCGGCGCGG CAGAAGCATT CATTCGCCTG
CTCGCACCAT TGGGTGGCCG GATCGCGCCG TTCTGGCTGC AATTGCCCGC CAGCTTCACC
CCACAGCGGC TTGCCGAACT GGTCGGTTTT ATCGACGAGC TGAACGTCCC GCTGGCAGTA
GAAGTGCGCA ACATGGCGTT TTTCATGAAG GGTGACGAGG AGCGCATGCT CAATCGCCTG
TTGCTGGATC GAGGTGTCGA GCGCATCTGT CTCGATTCGC GCGCACTGTT TAACTGCGTG
TCCAGCGACC CCGCCGTGCT TCACGCCCAG TCCAAGAAAC CCAAGGTGCC GCCACGCCCA
GCGGCGCTGA CCTCATTCCC TCAGGTTCGC TTCATCGGCG GCCCGGACCT GGAGGCCAAT
AACGAGTTTC TTGTGCAATG GGTGGAGAAG GTCGCCGTGT GGATTGAAGA GGGCCGTACG
CCCTATGTGT TTCTGCACAC CCCCGATAAC CTCAAGGCGC CCGAGCAGGC CAGACGTTTT
CACGAGCAAT TGATGTTGCG CTTGCCTGGG TTGCCGGCGT TGCCTGAACT GGATCGTGGG
CCGCAGGTGG AACAGTTGGG CTTGCTCTGA
 
Protein sequence
MIVTRLPYYL GCPSWSENAW RDSLYPEDAR PTDFLSLYTQ VFNVVEGNTT FYARPAATTV 
QRWAETMPED FRFTAKFHKD ISHNGDLRQQ VGAAEAFIRL LAPLGGRIAP FWLQLPASFT
PQRLAELVGF IDELNVPLAV EVRNMAFFMK GDEERMLNRL LLDRGVERIC LDSRALFNCV
SSDPAVLHAQ SKKPKVPPRP AALTSFPQVR FIGGPDLEAN NEFLVQWVEK VAVWIEEGRT
PYVFLHTPDN LKAPEQARRF HEQLMLRLPG LPALPELDRG PQVEQLGLL