Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1512 |
Symbol | |
ID | 1183149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1669952 |
End bp | 1670821 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392884 |
Product | hypothetical protein |
Protein accession | NP_791337 |
Protein GI | 28868718 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGTGA CTCGCCTGCC TTACTACCTC GGTTGTCCGT CATGGAGTGA AAACGCCTGG CGCGATTCGT TGTACCCCGA AGATGCCCGT CCCACTGATT TTCTGAGCCT CTACACGCAA GTGTTCAACG TCGTTGAAGG CAACACCACC TTCTATGCAC GGCCCGCTGC CACTACTGTT CAGCGTTGGG CAGAAACAAT GCCCGAAGAC TTTCGCTTCA CGGCCAAATT CCATAAAGAC ATCAGCCACA ACGGCGACCT TCGTCAACAG GTCGGCGCGG CAGAAGCATT CATTCGCCTG CTCGCACCAT TGGGTGGCCG GATCGCGCCG TTCTGGCTGC AATTGCCCGC CAGCTTCACC CCACAGCGGC TTGCCGAACT GGTCGGTTTT ATCGACGAGC TGAACGTCCC GCTGGCAGTA GAAGTGCGCA ACATGGCGTT TTTCATGAAG GGTGACGAGG AGCGCATGCT CAATCGCCTG TTGCTGGATC GAGGTGTCGA GCGCATCTGT CTCGATTCGC GCGCACTGTT TAACTGCGTG TCCAGCGACC CCGCCGTGCT TCACGCCCAG TCCAAGAAAC CCAAGGTGCC GCCACGCCCA GCGGCGCTGA CCTCATTCCC TCAGGTTCGC TTCATCGGCG GCCCGGACCT GGAGGCCAAT AACGAGTTTC TTGTGCAATG GGTGGAGAAG GTCGCCGTGT GGATTGAAGA GGGCCGTACG CCCTATGTGT TTCTGCACAC CCCCGATAAC CTCAAGGCGC CCGAGCAGGC CAGACGTTTT CACGAGCAAT TGATGTTGCG CTTGCCTGGG TTGCCGGCGT TGCCTGAACT GGATCGTGGG CCGCAGGTGG AACAGTTGGG CTTGCTCTGA
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Protein sequence | MIVTRLPYYL GCPSWSENAW RDSLYPEDAR PTDFLSLYTQ VFNVVEGNTT FYARPAATTV QRWAETMPED FRFTAKFHKD ISHNGDLRQQ VGAAEAFIRL LAPLGGRIAP FWLQLPASFT PQRLAELVGF IDELNVPLAV EVRNMAFFMK GDEERMLNRL LLDRGVERIC LDSRALFNCV SSDPAVLHAQ SKKPKVPPRP AALTSFPQVR FIGGPDLEAN NEFLVQWVEK VAVWIEEGRT PYVFLHTPDN LKAPEQARRF HEQLMLRLPG LPALPELDRG PQVEQLGLL
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