Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1503 |
Symbol | |
ID | 1183140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1660644 |
End bp | 1661921 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392875 |
Product | hypothetical protein |
Protein accession | NP_791328 |
Protein GI | 28868709 |
COG category | [S] Function unknown |
COG ID | [COG3930] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02421] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACGAGT ATCAACAGAC TATTCGTGCT TTATCGGATC GGATCGTCGT TGCACAGACG CCGATTCGCA TTCTGGATGC AGTGAAATGG GATGACACGG TTCGCAAGAA CTTTCTCGCC GCCAAGGGCA AGGCGCTCCC TGCTGTAGAT CGTGCCTATT ACGAAAACCG TCCGTTGGGG TTCGATTCGG TGGCCCTGAA ACAAGAGTTT CAGAACATCG AGCGGGACGT CACACGTCAA CTGGGACAGT TCAACCCGGT CGGGCAGATC ATGCGGCGCA TGTGCCGCGA GTACCGCATG GTGGTGCGCA TGCTTGAAGC GCGTGGCACT CCCGATTTCG GGCTGATCTC TCAGGAGCTT TACGGCGCGG CGTCCGATGC CTTTCACGCC GGTGACCCGA CCCTGGCCGA TCTGGGGCTG ATGCTTTCGG ATTACCTGAA TAACATTGCC GGGCGCGGTG ACCTGAAAGA CGAGCCGAAA ATCCTTACGG CCAAAGACGC TGTTTCGCTG CTGCAATCGC GCCTGAATCG GGTTTTTGGC GAGGCTGAAG AAACCATACG GGTGTTCGAG TCCGACGGTA TCGTCGCCGA CGCGGCCGCC GGTGCTGACT ACATCAAGAT CCGTACCGAC GCGATGTTCA ACGAGCGGGA TGTACGAGCG CTGGAGGTTC ACGAAGGTCT GGTGCACGTC GGCACCACAC TGAACGGGCA AAACCAGCCG ATCTGCACCT TCCTGTCCAA AGGCCCGCCG TCCTCGACGG TGACGCAGGA AGGGCTGGCG ATTCTCATGG AAGTCATTGC CTTTGCCTCC TACCCCAGCC GCCTGCGCAA GCTGACCAAC CGCACGCGCG CCATTCACAT GGCCGAGCAG GGCGCTGATT TTCTGCAGGT GTTCGAGTTC TATCGCGAGC AGGGTTTCGG CATGTCGGAG AGCTACGGCA ACGCCAGCCG GGTGTTCCGC GGCTCGGTGC CTGACGGTTT GCCGTTCACC AAAGACCTTT CGTACTTGAA GGGTTTCATC ATGGTCTATA ACTACATTCA GCTGGCGGTG CGCAAAGGCA AACTTGAGCA GGTGCCGCTG CTGTTCTGCG GCAAGACCAC GCTGGAAGAC ATGCGCACCC TGCGCCAACT GGTGGATGAA GGGCTAGTGG TTGCACCCAA GTACCTGCCA GAGCAGTTTC GTGACATGAA CGCATTATCG GCCTGGATGT GCTTCTCCAA CTTCCTCAAC CACCTGAGCC TGGACCGTAT CGAAGCGGAT TATTCGAATA TTTTGTAG
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Protein sequence | MDEYQQTIRA LSDRIVVAQT PIRILDAVKW DDTVRKNFLA AKGKALPAVD RAYYENRPLG FDSVALKQEF QNIERDVTRQ LGQFNPVGQI MRRMCREYRM VVRMLEARGT PDFGLISQEL YGAASDAFHA GDPTLADLGL MLSDYLNNIA GRGDLKDEPK ILTAKDAVSL LQSRLNRVFG EAEETIRVFE SDGIVADAAA GADYIKIRTD AMFNERDVRA LEVHEGLVHV GTTLNGQNQP ICTFLSKGPP SSTVTQEGLA ILMEVIAFAS YPSRLRKLTN RTRAIHMAEQ GADFLQVFEF YREQGFGMSE SYGNASRVFR GSVPDGLPFT KDLSYLKGFI MVYNYIQLAV RKGKLEQVPL LFCGKTTLED MRTLRQLVDE GLVVAPKYLP EQFRDMNALS AWMCFSNFLN HLSLDRIEAD YSNIL
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