Gene PSPTO_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1503 
Symbol 
ID1183140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1660644 
End bp1661921 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content58% 
IMG OID637392875 
Producthypothetical protein 
Protein accessionNP_791328 
Protein GI28868709 
COG category[S] Function unknown 
COG ID[COG3930] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02421] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGAGT ATCAACAGAC TATTCGTGCT TTATCGGATC GGATCGTCGT TGCACAGACG 
CCGATTCGCA TTCTGGATGC AGTGAAATGG GATGACACGG TTCGCAAGAA CTTTCTCGCC
GCCAAGGGCA AGGCGCTCCC TGCTGTAGAT CGTGCCTATT ACGAAAACCG TCCGTTGGGG
TTCGATTCGG TGGCCCTGAA ACAAGAGTTT CAGAACATCG AGCGGGACGT CACACGTCAA
CTGGGACAGT TCAACCCGGT CGGGCAGATC ATGCGGCGCA TGTGCCGCGA GTACCGCATG
GTGGTGCGCA TGCTTGAAGC GCGTGGCACT CCCGATTTCG GGCTGATCTC TCAGGAGCTT
TACGGCGCGG CGTCCGATGC CTTTCACGCC GGTGACCCGA CCCTGGCCGA TCTGGGGCTG
ATGCTTTCGG ATTACCTGAA TAACATTGCC GGGCGCGGTG ACCTGAAAGA CGAGCCGAAA
ATCCTTACGG CCAAAGACGC TGTTTCGCTG CTGCAATCGC GCCTGAATCG GGTTTTTGGC
GAGGCTGAAG AAACCATACG GGTGTTCGAG TCCGACGGTA TCGTCGCCGA CGCGGCCGCC
GGTGCTGACT ACATCAAGAT CCGTACCGAC GCGATGTTCA ACGAGCGGGA TGTACGAGCG
CTGGAGGTTC ACGAAGGTCT GGTGCACGTC GGCACCACAC TGAACGGGCA AAACCAGCCG
ATCTGCACCT TCCTGTCCAA AGGCCCGCCG TCCTCGACGG TGACGCAGGA AGGGCTGGCG
ATTCTCATGG AAGTCATTGC CTTTGCCTCC TACCCCAGCC GCCTGCGCAA GCTGACCAAC
CGCACGCGCG CCATTCACAT GGCCGAGCAG GGCGCTGATT TTCTGCAGGT GTTCGAGTTC
TATCGCGAGC AGGGTTTCGG CATGTCGGAG AGCTACGGCA ACGCCAGCCG GGTGTTCCGC
GGCTCGGTGC CTGACGGTTT GCCGTTCACC AAAGACCTTT CGTACTTGAA GGGTTTCATC
ATGGTCTATA ACTACATTCA GCTGGCGGTG CGCAAAGGCA AACTTGAGCA GGTGCCGCTG
CTGTTCTGCG GCAAGACCAC GCTGGAAGAC ATGCGCACCC TGCGCCAACT GGTGGATGAA
GGGCTAGTGG TTGCACCCAA GTACCTGCCA GAGCAGTTTC GTGACATGAA CGCATTATCG
GCCTGGATGT GCTTCTCCAA CTTCCTCAAC CACCTGAGCC TGGACCGTAT CGAAGCGGAT
TATTCGAATA TTTTGTAG
 
Protein sequence
MDEYQQTIRA LSDRIVVAQT PIRILDAVKW DDTVRKNFLA AKGKALPAVD RAYYENRPLG 
FDSVALKQEF QNIERDVTRQ LGQFNPVGQI MRRMCREYRM VVRMLEARGT PDFGLISQEL
YGAASDAFHA GDPTLADLGL MLSDYLNNIA GRGDLKDEPK ILTAKDAVSL LQSRLNRVFG
EAEETIRVFE SDGIVADAAA GADYIKIRTD AMFNERDVRA LEVHEGLVHV GTTLNGQNQP
ICTFLSKGPP SSTVTQEGLA ILMEVIAFAS YPSRLRKLTN RTRAIHMAEQ GADFLQVFEF
YREQGFGMSE SYGNASRVFR GSVPDGLPFT KDLSYLKGFI MVYNYIQLAV RKGKLEQVPL
LFCGKTTLED MRTLRQLVDE GLVVAPKYLP EQFRDMNALS AWMCFSNFLN HLSLDRIEAD
YSNIL