| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1502 |
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| Symbol | |
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| ID | 1183139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1659777 |
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| End bp | 1660502 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392874 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | NP_791327 |
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| Protein GI | 28868708 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACAATTG CAAGAGAAGG GGCTGCCGGA GTAGCGAGTG CGGTGGCCAA AAGTGTCAAG
TATCAAGGCC GCAAGGCTGC TCGGGAGGGC AGTGAACAAC GCAGGCAGGT GATTCTCGAT
GCCGCCATGC GCATTGTGGT GCGTGACGGT GTACGTGCCG TGCGTCATCG TGCCGTGGCC
GCCGAGGCCG GTGTGCCGCT GTCTGCGACC ACCTACTATT TCAAGGACAT CGATGATCTG
CTGACCGATG CCTTCGCCCA ATACGTGCAA CGCAGTGCCG ACTACCTTGC GCGGCTGTGG
CAGACCACCG AAATCATCCT GCGCGAGATG ATGAGCCGCA GCTCCGGCAG CCCGACCGAC
CGTTTTCGGC TGGCCGACGA CATCGCACGC ATGGCGATGG AGCATATTCG CCATCAGTTG
CTGACCCGCC GCGAATACTT GATTGCCGAG CAGGCGTTCT ACCATGAAGC ACTGATCAAC
CCGCGTCTGA CCCCGCTGGT CATGGCCCAT CAGGAAATTT TGTTGCAGGG CAGCTGTCAG
TTCTTTCAGG TGATCGGCTC GCTGCAGCCT TATCAGGACG CTCAGGTGTT GACGGGATTG
ATCCGTCGCA TGGAGTATCA AGGCCTGCTT CATGGTCCGC AGCGTCAAGC GGGGGACGAA
ATGCTTGATA TCCTCACTCG CCAGTTGCGT CTGGTACTGG GTACGCCGCA ACCGCTTCGA
GGGTAG
|
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| Protein sequence | MTIAREGAAG VASAVAKSVK YQGRKAAREG SEQRRQVILD AAMRIVVRDG VRAVRHRAVA
AEAGVPLSAT TYYFKDIDDL LTDAFAQYVQ RSADYLARLW QTTEIILREM MSRSSGSPTD
RFRLADDIAR MAMEHIRHQL LTRREYLIAE QAFYHEALIN PRLTPLVMAH QEILLQGSCQ
FFQVIGSLQP YQDAQVLTGL IRRMEYQGLL HGPQRQAGDE MLDILTRQLR LVLGTPQPLR
G
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