| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1501 |
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| Symbol | lysS |
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| ID | 1183138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1658196 |
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| End bp | 1659698 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392873 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | NP_791326 |
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| Protein GI | 28868707 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGACC AACAACTCGA CCCGCAAGCC CTGCAACAGG AAGAAAACAC CCTGATCGCC
CTGCGCAAGG AAAAGCTTGC TGCCGGCCGT GCCAAGGGTC AGGCCTTCCC CAACGACTTC
CGCCGCGACA GCTACTGCAA TGACCTGCAG AAACAGTACG TCGACAAGAC CAAGGAAGAA
CTGGCAGAGG CAGCGATCCC GGTCAAGGTT GCCGGTCGCA TCATGCTTAA CCGTGGTTCG
TTCATGGTCA TCCAGGACAT GACCGGGCGC ATCCAGGTCT ATGTCAATCG CAAAACCCTG
CCTGAAGAAA CCCTGGCCGA GGTGAAAACC TGGGACCTGG GCGACATCAT CGCGGCCGAA
GGTACGCTGG CACGCTCCGG CAAGGGCGAC CTGTACGTCG AAATGACCAG CGTGCGCCTG
CTGACCAAGT CGCTGCGCCC GCTGCCCGAC AAGCACCACG GCCTGACCGA TACCGAGCAG
CGCTACCGCC AGCGTTACGT TGACCTGATC GTCAACGAAG ACGTGCGCGA AACCTTCCGT
GTGCGCTCGC AGGTCATCGC TCACATCCGC AGCTTCCTGA TGCAGCGTGA CTTCCTTGAA
GTTGAAACGC CGATGTTGCA GACCATTCCT GGCGGTGCGG CAGCCAAGCC GTTTGAAACC
CACCACAATG CACTGGACCT GGAAATGTTC CTGCGTATTG CACCGGAGCT GTACCTCAAG
CGTCTGGTGG TCGGCGGTTT CGAGAAAGTC TTCGAGATCA ACCGCAACTT CCGTAACGAA
GGTGTTTCGA CCCGGCATAA CCCCGAGTTC ACCATGCTCG AGTTCTACCA GGCCTACGCT
GACTACGAAG ACAACATGGA CCTCACCGAA GAACTGTTCC GCGAGCTGGC GCAGCTGGTG
CTGGGCAGCA CCGACGTGCC TTACGGCGAC AAGGTGTTCC ACTTCGGCGA ACCGTTCGTG
CGCCTGTCGG TGTTCGATTC GATCCTCAAG TACAACCCTG AGCTGACCGC TGCCGATCTG
CAGGATGTGG ACAAAGCGCG CGCCATCGCC AAGAAGGCGG GTGCGAAAGT GCTCGGCTTC
GAAGGATTGG GCAAACTGCA GGTGATGATT TTCGAAGAAC TGGTCGAGCA CAAGCTGGAA
CAGCCCCACT TCATCACCCA GTACCCGTTC GAAGTGTCGC CGCTGGCCCG TCGCAACGAT
GACAACCCGA ACGTCACCGA CCGTTTCGAG CTGTTCATCG GCGGCCGCGA GATCGCCAAC
GCCTACTCCG AGCTCAATGA CGCTGAAGAT CAGGCCGAAC GCTTCCAGGC CCAGGTGGCC
GACAAGGACG CCGGTGACGA CGAAGCCATG CACTACGACG CCGACTTTGT TCGTGCGCTG
GAATACGGCA TGCCGCCCAC GGCGGGTGAG GGGATCGGTA TCGACCGGTT GGTGATGCTG
CTCACCGACT CGCCGTCGAT CCGGGACGTG ATCCTGTTCC CGCACATGCG CCCCCAGGCG
TAA
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| Protein sequence | MSDQQLDPQA LQQEENTLIA LRKEKLAAGR AKGQAFPNDF RRDSYCNDLQ KQYVDKTKEE
LAEAAIPVKV AGRIMLNRGS FMVIQDMTGR IQVYVNRKTL PEETLAEVKT WDLGDIIAAE
GTLARSGKGD LYVEMTSVRL LTKSLRPLPD KHHGLTDTEQ RYRQRYVDLI VNEDVRETFR
VRSQVIAHIR SFLMQRDFLE VETPMLQTIP GGAAAKPFET HHNALDLEMF LRIAPELYLK
RLVVGGFEKV FEINRNFRNE GVSTRHNPEF TMLEFYQAYA DYEDNMDLTE ELFRELAQLV
LGSTDVPYGD KVFHFGEPFV RLSVFDSILK YNPELTAADL QDVDKARAIA KKAGAKVLGF
EGLGKLQVMI FEELVEHKLE QPHFITQYPF EVSPLARRND DNPNVTDRFE LFIGGREIAN
AYSELNDAED QAERFQAQVA DKDAGDDEAM HYDADFVRAL EYGMPPTAGE GIGIDRLVML
LTDSPSIRDV ILFPHMRPQA
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