| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1499 |
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| Symbol | |
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| ID | 1183136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1655919 |
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| End bp | 1656923 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637392872 |
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| Product | response regulator/GGDEF domain protein |
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| Protein accession | NP_791325 |
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| Protein GI | 28868706 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGACC TGCAGGCGGA CGACATCAAA ACCTCGGATG AAAACAGCGC AATGGTGCTG
CTGGTCGATG ATCAGGCCAT GATTGGCGAA GCGGTACGGC GTGGTCTGGC CGGCCATGAA
TCGATCGACT TCCATTTTTG CGCCGACCCG CACCAGGCGA TTGCCCAGGC TGTGCAGATC
AAGCCGACGG TGATTCTGCA GGATCTGGTC ATGCCCGGCC TTGACGGCCT GACGCTGGTT
CGCGAATACC GCAGCAACCC GCTGACCCGT GACATTCCGA TCATCGTGCT CTCCACCAAG
GAAGACCCGC TGATCAAAAG CGCAGCGTTC GCGGCCGGGG CCAACGACTA TCTGGTCAAA
CTGCCGGACA ACATCGAGCT GGTGGCGCGC ATTCGCTATC ACTCGCGCTC CTACATGACC
CTGTTGCAGC GTGATGAAGC CTATCGCGCC CTGCGCGTCA GCCAGCAACA GTTGCTCGAC
ACCAATCTGG TGCTGCAGCG CCTGATGAAC TCCGATGGCC TGACCGGGCT GTCGAACCGT
CGCCACTTCG ACGAATACCT GGAGCTGGAG TGGCGTCGAG CGACCCGCGA TCAGGCGCAG
TTGTCGCTGC TGATGATCGA TGTGGACTAC TTCAAGGCCT ACAACGACAA CTTTGGGCAT
CTGGAGGGCG ACGAAGCCCT GCGTCAGGTG GCCAAGGCAA TCCGCAACAG TTGCAGTCGC
CCGTCGGACT TGCCGGCGCG CTACGGCGGC GAGGAATTCG CCATGGTCCT GCCCAACACG
TCGCCGGGTG GTGCGCGTCT GCTTGCTGAA AAACTGCGCC AGAGCGTGGC CGGCATGAAC
ATCCCGCACA TCGCCCCGGT GCCGGGTTCC AGCCTGACCG TGAGTATCGG CGTCGCCACC
GTGACGCCGC AGGTGGGCCA GCACAGCAGG CAACTGATCC TCGACGCCGA CAAAGGGCTG
TATCTGGCCA AGAACAATGG GCGCAATCAG GTGGCTGCCG GCTGA
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| Protein sequence | MDDLQADDIK TSDENSAMVL LVDDQAMIGE AVRRGLAGHE SIDFHFCADP HQAIAQAVQI
KPTVILQDLV MPGLDGLTLV REYRSNPLTR DIPIIVLSTK EDPLIKSAAF AAGANDYLVK
LPDNIELVAR IRYHSRSYMT LLQRDEAYRA LRVSQQQLLD TNLVLQRLMN SDGLTGLSNR
RHFDEYLELE WRRATRDQAQ LSLLMIDVDY FKAYNDNFGH LEGDEALRQV AKAIRNSCSR
PSDLPARYGG EEFAMVLPNT SPGGARLLAE KLRQSVAGMN IPHIAPVPGS SLTVSIGVAT
VTPQVGQHSR QLILDADKGL YLAKNNGRNQ VAAG
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