Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1494 |
Symbol | |
ID | 1183131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1649986 |
End bp | 1650522 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637392867 |
Product | CheW domain protein |
Protein accession | NP_791320 |
Protein GI | 28868701 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAC AATCGCCGAG GCGCAACGGC ACGCCACTGA CTGCAAGCAA ACTCTTCCTG CTGTTCTGTA TCGGCGAAGA CCGCTATGCA CTGGACGCGA CCGAGATCGC TGAAATCCTG CCGCGTGTGA AGCTCAAGGC GATTGCCCGG GCTCCGCACT GGGTGGCGGG GATCTTCGCC CATCGCGGCG AGATCGTGCC GGTCATTGAC ATCAGCGCGC TTAACTCCGG TCAGCCCGCG CGCTTGCGCA CCAGCACACG TATGGTGCTG GTGCACTATC GGTATGATGA TGCGCATCCG GCGCAGTTGC TCGGGCTGAT CCTCGAACAG GCGACCGAAA CCCTGCGCTG CCCGGTCGCG CAGTTCAAGG CATACGGGCT GGACAATCGA CTGTCGCCTT ATCTGGGGCC GGTTCGCGAG GACGAACAGG GCCTGCTGCA ATGGATTCAC GTTCAGGAGT TGTTGAGCGA GCCGGTTCGC GAGTTGCTGT ACCCGGTGCC ACCAATCGAC CTCGACCTGC TTGAGGACGC GTCATGA
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Protein sequence | MTEQSPRRNG TPLTASKLFL LFCIGEDRYA LDATEIAEIL PRVKLKAIAR APHWVAGIFA HRGEIVPVID ISALNSGQPA RLRTSTRMVL VHYRYDDAHP AQLLGLILEQ ATETLRCPVA QFKAYGLDNR LSPYLGPVRE DEQGLLQWIH VQELLSEPVR ELLYPVPPID LDLLEDAS
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