| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1482 |
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| Symbol | |
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| ID | 1183119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1627718 |
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| End bp | 1631359 |
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| Gene Length | 3642 bp |
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| Protein Length | 1213 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637392855 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | NP_791308 |
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| Protein GI | 28868689 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGCA GAGTCAGGGA GACAGGCAGC ACAATGAGAG GCCGCGCATG GCGCATGGTA
TGGGTGCTGT TGGCGCTGGT TTTCGCCCGG TCAATCGATG CCGCGCAAAG CTTGCCGTTC
ACCCTGACAG CGCCTTTCGT GGTGTCGCAA GACCTTGATC TTGATGCCAG TGACCGGGCA
TGGCTCGACC AGCGCAAGGT GCTTCGGGTC GGCATTGCGA TTGCCGATTA CGAACCCATT
GATATCACCA GTGATCGCAA TCGCTATCAG GGCATCAGCG CCGACTACCT TGGGCTGGTC
AGTGACCAAC TGAACATTTC GACGCAGGTA ACGGGGTTTG CCAAACGCGA TGAGGCCATC
GAGGCGCTGC GCGAAGGCAG AATCGACCTG CTGACCAGCG CCAACGGGTT TGAGCGAGGT
GTGAGGGGGC TGTCGTTTTC CAGCGAGTAC ATGCCTGATC GATCTGTGGT GGTCGGCCGT
GGCAACGACG TGAGCCCACC ATCGAGCCTG GCCGATAAAA AGGTGGTGCT GCTTGATGGT
TATGCTGATT CAGATGTGGT GCACCGGGTT TACCCGAACA GCGAGATCAT TATCGCGCCT
AACCTCTACA GCGCGCTGGA GGCTTTGAGT CAGGGTGAAG TCGACATCTT TATCGGTAAC
GAAGTGATTG TCCGGGCCTA CATCGCGCTG CGCCCGTACC TCGGGTTGCA GATCAAGTTC
GAAAGCCAGT TGCCCCCGGT GGGTTTTGCC TTTGCGGCTC GCCAGGATGA ACAGCGCTTG
CTGGCGTTGA TTGATCGTGC ATTGAACAGT ATTGATCCTG CGGTCGGTCG TGAGGTGCTC
GTCCGCTGGA CCATCGGCCT TGGCGCGGAT GTGGAAGGCC AGCGGATTCG CCTTAGCGGC
GCAGAACGAC GCTGGCTGCT CAAGCATCCG AGTGTGACGA TCTCCACCAC GCAACATCCA
CCCTACATCT ACAAAGACAA AAATGGTCAC TGGGTGGGGT TGAACGCGGA TTTACTGGCG
CGTATCTCGC GCATGACCGG CTTGCAGTTC GTACACAAGG AAGCAGCCTC CACGCAGCAG
AGCATTGAGG TGTTGCGCGC CGGCCGGGCC GACATGAACA CCACACTGGC GGAAAACGCA
GAGCGCCGAA AGTTTTTGGA CTTTACCTAT TCGTTCGGCG GCAACAGCTG GATGTTCGTG
GTGCACTCCG ATCGATCTTC TCAGGTATCG CTCGACAGCC TGTCAGGCCA GGTACTCGCC
CTGCCTGCCC GGCATGCGCT CGAGGACATG ATCAAGCGAG AGTACCCGTT GATCAAGCTA
CGGCTGGTCG AGACCTACGA TCAGGCCCGC GCGCTGGTTG AAAGCGGTGC GGCCGATGCG
ACCATTCAAA ATGAGGCCGG TGCGTACCTG TTTCCGTCGG GGCAACTGAA GGTGGCCCGC
AGCGTCGATG GCAAATGGTC GCCCGACAGG TTTTCGGTGA TCAAGACCCA GCCCGAGCTG
CTGGGCATTC TGAACAAGGC GCTGGAAGAG TTTCCGGTTG CTGAGTTGCG TTCGATTCGT
CTGAAGTGGC TGGGGTCGTC GTTGCCTCAG CCCTCGTTGT GGGGGCGTAT TCCGCGGTGG
GTGTTCTGGG TCGTGGCCCT CGCGTTGTTG ACCGGGCTGG TGTCGCTGGC CTGGAGCAGT
CGCCTCAAGG TGCAGATTCG CCAACGCCTC AAGGCTGAAC GCCAGCTCAA TGATCAACTG
GCTTTCAAGC ATGCCCTGCT CGACGGTATT CCCAATCCGA TTTACGTGCG CGACCTCAAG
GGACGCCTGA TTTCCTGCAA CCGCAGCTAC GAGCAGAGCC TGGGCGTCAG TTTCGAGCAG
ATGAATGGCC GGCGCCTTCT TGATGTCGAA GTGATCCCGC GGCCGCTGGC CGAACAGATG
CATGCCGATT ACCTCGCACT GCTGGAAAAC CATCAGCCGG TCTTTTCCGA CCGCACAATC
GAACTGTCCG GCAAGCGCAT GAACGTCTGG CAATGGACGG TGCCTTTCTT TGCCGCAGAT
GGGCAGTTGC AGGGTTTGTT GGGGGGCTGG ATCGACATCA CCGAGCGCAA GCTGCTGGAA
CAGCAGCTCG AGCAAGCAGT ACGCCTGGCG GCTCAGGCCA ACGAGGCCAA AAGTGTCTTT
CTGGCCAGCA TGAGCCACGA AATCCGGACA CCGATGGGGG CGATCATCGG TTTGCTGGAG
CTGGAATGTG AGCAGGCCTT GCGTCGGGGT GAAGAACCGA CGCAAGGCCT GCAGGTGGCT
CATCGTTCCG CGACGGAGCT GGTGGCGCTG ATTGGCGAAA GCCTTGACCT TGCCAGAATC
GAAGCCGGTG GCATGCAGTT GTCATTGGTT GTCACGCCTC TGCAGACTTT TTTCGAGGGC
GTTCTCGCGC TTTTTTCAGC CCAGGCCAGG GAGAAAGGCC TGGAGTTGCG GCTAGAACTT
GCCGAACAGG CGCGTGGCGA CTATTGGCTC GACCCGCTGA GGTTGCGTCA GGTCGTGCAT
AACGTGTTGG GCAATGCCTT GAAATTCACC CGGCAAGGGG CGGTGGTCGT GAAGGTTGAG
GTATCAGATG ACCCGCCGGA CGCTTCACGG GTGCGCATCG GCATCATGGA CAGCGGAGTG
GGCATTGAAC CGGCACGTCA GCAGCAGATA TTCCAGCCGT TCACACAAGC TGCCGATGAC
ACGGCTGCAC GCTACGGAGG CAGTGGCCTG GGGCTGAGCA TCACCCGGCA ACTGGTGGAG
CTGATGAAGG GCGATATCAG CCTGCACAGC GAACCCGGCA AGGGGACGCG GGTCACCGTC
GACGTGCCGC TGGCCAGGGT GACCGAACCG GTTTTGCCTT CTGCCGAGGC CCTGGATGCA
ACCCTTGATG CACTCCCTGA TACGCGCATT CTGAACCTGC TGGTGGTCGA TGACATGTCG
GCGAATCGAC TGGTGTTGAC CCGGCAGCTC GAGTTTCTGG GGCATCGGGT CGTGCCTGTC
GAAGGCGGTG AGGCGGCACT GTCGATCTGG CGCAAAGAGC CTTTCGATGC GCTCATCACC
GATTGCAACA TGCCAGGCAT CAGCGGGTAT GCATTGACCG AAGCCATTCG CCAGATAGAA
GAGACGGAGC AACGACAGCG CTGCCCGGTG ATTGGCTGTA CCGCCAATGC GATGACTGAC
GAGGCCGCGC GATGTGAGCA GGCCGGCATG GACGGGCTGC TGATCAAACC GCTTTCACTG
GCACGTCTGG CCCGGGAGCT GGCGGATAGG GTGCGTGAGC CAACCTTCGA CATACGCACG
CTGCAAAACA TGACGCGCGC CAATCCGGAT CAGATGCAGC GCTTGTTGAG CGAACTGTGG
AAAAACCTGC GCCATGAGCA CGCCTTGCTG GAGCCAGCCG TGACCGCAAA TGACTGGAAG
ACCATGAGCG CCAGCCTGCA TCGGCTCAAA GGTGCGGCCA GCCTGGTTGA TGCGGTGCCT
CTGGCCAGAG CGTGCGCGGC GCTGGACGAC AGTGTTCGGC AGCAGCGTAT GAGCGATGTG
CACGAGCGCT GGCTGGCACT GGAGAACGCG ATGACCGGAT TGCGCGCTGA TATCGAAATG
CAATTGGTGG CAGTGCCTGA AACTGCGCCC CCTCGCGATT GA
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| Protein sequence | MQSRVRETGS TMRGRAWRMV WVLLALVFAR SIDAAQSLPF TLTAPFVVSQ DLDLDASDRA
WLDQRKVLRV GIAIADYEPI DITSDRNRYQ GISADYLGLV SDQLNISTQV TGFAKRDEAI
EALREGRIDL LTSANGFERG VRGLSFSSEY MPDRSVVVGR GNDVSPPSSL ADKKVVLLDG
YADSDVVHRV YPNSEIIIAP NLYSALEALS QGEVDIFIGN EVIVRAYIAL RPYLGLQIKF
ESQLPPVGFA FAARQDEQRL LALIDRALNS IDPAVGREVL VRWTIGLGAD VEGQRIRLSG
AERRWLLKHP SVTISTTQHP PYIYKDKNGH WVGLNADLLA RISRMTGLQF VHKEAASTQQ
SIEVLRAGRA DMNTTLAENA ERRKFLDFTY SFGGNSWMFV VHSDRSSQVS LDSLSGQVLA
LPARHALEDM IKREYPLIKL RLVETYDQAR ALVESGAADA TIQNEAGAYL FPSGQLKVAR
SVDGKWSPDR FSVIKTQPEL LGILNKALEE FPVAELRSIR LKWLGSSLPQ PSLWGRIPRW
VFWVVALALL TGLVSLAWSS RLKVQIRQRL KAERQLNDQL AFKHALLDGI PNPIYVRDLK
GRLISCNRSY EQSLGVSFEQ MNGRRLLDVE VIPRPLAEQM HADYLALLEN HQPVFSDRTI
ELSGKRMNVW QWTVPFFAAD GQLQGLLGGW IDITERKLLE QQLEQAVRLA AQANEAKSVF
LASMSHEIRT PMGAIIGLLE LECEQALRRG EEPTQGLQVA HRSATELVAL IGESLDLARI
EAGGMQLSLV VTPLQTFFEG VLALFSAQAR EKGLELRLEL AEQARGDYWL DPLRLRQVVH
NVLGNALKFT RQGAVVVKVE VSDDPPDASR VRIGIMDSGV GIEPARQQQI FQPFTQAADD
TAARYGGSGL GLSITRQLVE LMKGDISLHS EPGKGTRVTV DVPLARVTEP VLPSAEALDA
TLDALPDTRI LNLLVVDDMS ANRLVLTRQL EFLGHRVVPV EGGEAALSIW RKEPFDALIT
DCNMPGISGY ALTEAIRQIE ETEQRQRCPV IGCTANAMTD EAARCEQAGM DGLLIKPLSL
ARLARELADR VREPTFDIRT LQNMTRANPD QMQRLLSELW KNLRHEHALL EPAVTANDWK
TMSASLHRLK GAASLVDAVP LARACAALDD SVRQQRMSDV HERWLALENA MTGLRADIEM
QLVAVPETAP PRD
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