| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1480 |
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| Symbol | hom |
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| ID | 1183117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1624779 |
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| End bp | 1626083 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392853 |
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| Product | homoserine dehydrogenase |
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| Protein accession | NP_791306 |
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| Protein GI | 28868687 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0460] Homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.270684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAACCGG TCAAAGTAGG CATATGTGGG CTGGGTACTG TCGGTGGCGG TACTTTCAAC
GTACTTCAGC GTAACGCCGA GGAGATTGCC CGCCGCGCCG GGCGTGGAAT CGAAGTGGCG
CAAATTGCAG TTCGTACACC AAACCCCAAC TGCCAGATTG GCAGTACGCC TACCACCAGC
GATGTGTTCG CCGTTGCGAC CAACCCTGAA ATCGACATCG TCGTCGAACT GATCGGCGGA
TACACTCTTG CCCGTGAACT GGTCCTCAAG GCCATCGAAA ACGGCAAGCA CGTGGTCACT
GCCAACAAGG CGCTGATCGC GGTGCACGGC AACGAAATCT TCGCCAAGGC GCGTGAGAAG
GGCGTGATCG TGGCGTTTGA AGCGGCTGTT GCCGGTGGTA TTCCGGTCAT CAAGGCCATT
CGTGAAGGCC TGTCGGCGAA CCGTATCAAC TGGGTGGCGG GCATCATCAA CGGCACGGGT
AACTTCATCC TTACTGAAAT GCGCGAGAAA GGCCGCACGT TCCCGGATGT GCTGGCTGAA
GCCCAGGCGC TGGGTTACGC CGAAGTCGAC CCGACCTTTG ACGTCGAGGG GATCGATGCG
GCGCACAAGC TGACCATCCT GGCTTCCATT GCCTTTGGCA TTCCGTTGCA GTTCGACAAG
GCTTACACCG AAGGCATCAC CAAGCTGACG ACGGCGGACG TGAACTACGC CGAAGCGCTG
GGCTACCGCA TCAAGCATCT GGGTGTTGCG CGCAGCACCG CCCAGGGCAT CGAATTGCGC
GTACACCCGA CGCTGATCCC GGCCGATCGT CTGATCGCCA ACGTCAATGG CGTCATGAAC
GCCGTGATGG TCAACGGTGA TGCCTCCGGT TCGACGCTGT TCTACGGTGC TGGTGCCGGT
ATGGAGCCTA CCGCGTCTTC CGTCGTGGCC GATCTGGTGG ACGTGGTGCG TGCCATGACC
TCTGACCCGG AAAACCGCGT GCCTCATCTG GCCTTCCAGC CTGATTCGCT GTCCGCGCAT
CCGATCTTGC CGATCGAGGC GTGCGAAAGC GCCTATTACC TGCGCATCCA GGCCAAGGAT
CATCCGGGCG TGCTGGCTCA GGTGGCAAGC ATCCTGTCCG AGCGCGGCAT AAACATCGAA
TCGATCATGC AAAAGGAAGT CGAAGAACAC GACGGCCTGG TGCCGATGAT TCTGCTGACC
CACCGTGTCG TTGAACAACG CATCAACGAC GCCATTCAGG CGCTCGAAGC GTTGCAGGAT
GTGGTGGGCC CGGTAGTCCG TATTCGCGTC GAACATCTTA ATTAA
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| Protein sequence | MKPVKVGICG LGTVGGGTFN VLQRNAEEIA RRAGRGIEVA QIAVRTPNPN CQIGSTPTTS
DVFAVATNPE IDIVVELIGG YTLARELVLK AIENGKHVVT ANKALIAVHG NEIFAKAREK
GVIVAFEAAV AGGIPVIKAI REGLSANRIN WVAGIINGTG NFILTEMREK GRTFPDVLAE
AQALGYAEVD PTFDVEGIDA AHKLTILASI AFGIPLQFDK AYTEGITKLT TADVNYAEAL
GYRIKHLGVA RSTAQGIELR VHPTLIPADR LIANVNGVMN AVMVNGDASG STLFYGAGAG
MEPTASSVVA DLVDVVRAMT SDPENRVPHL AFQPDSLSAH PILPIEACES AYYLRIQAKD
HPGVLAQVAS ILSERGINIE SIMQKEVEEH DGLVPMILLT HRVVEQRIND AIQALEALQD
VVGPVVRIRV EHLN
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