Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1479 |
Symbol | dsbC |
ID | 1183116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1623892 |
End bp | 1624632 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392852 |
Product | thiol:disulfide interchange protein DsbC |
Protein accession | NP_791305 |
Protein GI | 28868686 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1651] Protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.24181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTGC ATCAGATTTT CGCTGCCGCC GCTGTCATGC TGGCCAGCAC ATTCAGTATG TTTGCCGTTG CAGATGCTGC CCCCGATCAG GCCATTCGCA AGACACTGGA TTCGCTCCAG CTGGAGCTGC CGGTCGAGAG CATTTCGCCG AGCCCGCTCA ATGGCCTTTA CGAGGTCAAA CTCAAGGGCG GTCGCGTGCT GTACGCCAGC GCCGACGGTC AGTTCGTGGT GCAGGGTTAT CTGTTTCAGG TGCAGAACGG CAAGCCGGTC AACCTGACCG AAAAGACCGA GCGTCTGGCC ATTTCCAAGA CCATCAATGC CATTCCGCTT TCCGACATGG TCGTCTACCC GGCGGTGGGC GAGACCAAAT CGCACATTAC GGTGTTCACC GACACCACCT GCCCGTACTG CCACAAGCTG CATGAAGAAG TCGGGCAGTT GAACAAAATG GGCGTTGAAG TCCGTTACAT GGCCTTCCCG CGCCAGGGTC TGGGTTCTCC GGGTGACGAA CAGTTGCAGG CCGTCTGGTG TTCCAAGGAC CGTAAAAGCG CCATGGATCG CATGGTCGAT GGCAAGGACA TCAAAGCTGC CAAGTGCGAC AATCCGGTGA GCAAGCAGTA TGAAATCGGT CAGTCGATCG GCGTCAACGG CACCCCTGCG ATTGTCCTCG CCGACGGTCA GGTGATTCCG GGTTATCAGC CTGCTGCTCA GGTTGCCAAA CTGGCAATGG GCGCCAAGTA A
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Protein sequence | MRLHQIFAAA AVMLASTFSM FAVADAAPDQ AIRKTLDSLQ LELPVESISP SPLNGLYEVK LKGGRVLYAS ADGQFVVQGY LFQVQNGKPV NLTEKTERLA ISKTINAIPL SDMVVYPAVG ETKSHITVFT DTTCPYCHKL HEEVGQLNKM GVEVRYMAFP RQGLGSPGDE QLQAVWCSKD RKSAMDRMVD GKDIKAAKCD NPVSKQYEIG QSIGVNGTPA IVLADGQVIP GYQPAAQVAK LAMGAK
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