| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1469 |
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| Symbol | |
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| ID | 1183106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1613824 |
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| End bp | 1615140 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637392842 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_791295 |
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| Protein GI | 28868676 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0457955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCA CCCCGCTCTC TCGCGAAGAT AACGACGCAC CCGCACAACC GGTGAACTCG
GCGACCCGCG TCGCCACTGC CAGCTTCATC GGCACCGCCA TCGAGTTCTA CGACTTCTAT
GTCTACGCCA CCGCCGCCGC ACTGGTGATC GGTCCGGTGT TTTTCCCGCA GACCTCAGGC
ACGGCACAAA TGCTGTCGTC ATTTCTGACA TTCGGTATCG CCTTTCTCGC ACGTCCACTG
GGCTCGGCAC TGTTTGGTCA CTTCGGCGAC CGGATCGGCC GCAAGTCGAC GCTGGTTGCA
TCGCTACTGC TGATGGGGGT CTGCACCACG CTGATCGGCG TACTGCCTGG CTACGCAACC
ATCGGCGCAT GGGCACCGAT TCTGTTGTGC GTGCTGCGCT TCGGCCAAGG GCTTGGTCTG
GGCGGGGAAT GGGGCGGGGC GGCCTTGCTG GCGACTGAAA ATGCCCCCAA AGGCCAGCGC
GCGTGGTTCG GCATGTTTCC GCAACTAGGG CCATCGATCG GCTTTCTGGC GGCCAATGGT
CTGTTTCTGG CGCTGGCAAT GATCCTGGAT GACGAACAGT TTCGTTCGTG GGGCTGGCGA
ATTCCGTTTC TGCTCAGCGC CGTGCTGGTC ATGGTCATGG TCGGGCTCTA CGTGCGCCTG
AAACTGGAAG AAACACCCGT GTTCGCCAAA GCGATGGCGC GTCACCAGCG CGTCAGTCTG
CCGATAGTTG AAACCGTCAG CCAGCACTGG AAGCCCATGT TGCTCGGCGC AGCATCAATG
GTGGTCTGTT ATGCGCTGTT TTATATCTCG ACCGTGTTTT CGCTGAGCTA CGGCGTGTCT
ACGCTGGGCT ATACCCGCGA GATATTCCTC GGGCTGCTGT GCTTCGCGGT GCTGTTCATG
GCGGCAGCAA CGCCATTGGC TGCGCTGGCG AGTGACCGAT TCGGGCGCAA GCCGGTGCTG
ATTGTCGGCG GCGTGCTGGC GATCCTCTCA GGTTTCACCA TGGAACCGCT GTTGACACAT
GGCAGTACCT GGGCCGTGGC GCTGTTTCTG TGCATCGAGC CTTTCTTGAT GGGTGTGACT
TTTGCTCCGA TGGGCGCCCT GCTACCGGAA CTATTCCCGA CGCACGTGCG CTACACAGGC
GCATCGGCGG CCTACAACCT GGGCGGAATC GTGGGCGCAT CGGTCGCCCC CTTCTTCGCC
CAGAAACTGG TGGCGATGGG CGGCTTGAGC TGGGTTGGCG GGTATGTGTC TGCCGCGGCG
CTGATCAGCG TGCTGGCGGT GCTGAGCTTG AAGGAGACGA GAGATAGGGA GCTTTGA
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| Protein sequence | MTSTPLSRED NDAPAQPVNS ATRVATASFI GTAIEFYDFY VYATAAALVI GPVFFPQTSG
TAQMLSSFLT FGIAFLARPL GSALFGHFGD RIGRKSTLVA SLLLMGVCTT LIGVLPGYAT
IGAWAPILLC VLRFGQGLGL GGEWGGAALL ATENAPKGQR AWFGMFPQLG PSIGFLAANG
LFLALAMILD DEQFRSWGWR IPFLLSAVLV MVMVGLYVRL KLEETPVFAK AMARHQRVSL
PIVETVSQHW KPMLLGAASM VVCYALFYIS TVFSLSYGVS TLGYTREIFL GLLCFAVLFM
AAATPLAALA SDRFGRKPVL IVGGVLAILS GFTMEPLLTH GSTWAVALFL CIEPFLMGVT
FAPMGALLPE LFPTHVRYTG ASAAYNLGGI VGASVAPFFA QKLVAMGGLS WVGGYVSAAA
LISVLAVLSL KETRDREL
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