Gene PSPTO_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1465 
Symbol 
ID1183102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1610585 
End bp1611109 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content58% 
IMG OID637392838 
Productbacterial transferase, hexapeptide repeat protein 
Protein accessionNP_791291 
Protein GI28868672 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTC GCCTGGGAGA TTCCAGTGTC CAGACCGATC CGCAGAGCTG GGTTGCGCCC 
AGCGCGGTGC TCATTGGCAA TGTGAAGCTT GAGGCTGGCG CCAGTGTCTG GTTCAACGCA
GTGCTGCGCG GCGATAACGA ACTGATTCAC ATCGGTGAAA ACAGCAACGT GCAGGATGGC
ACAGTTATGC ACACGGACAT GGGCTCGCCG CTTGCGATCG GCAAGGGCGT GACCATTGGC
CATAACGCCA TGCTGCATGG GTGCAGCGTT GACGATTACA GCCTGATCGG CATCAATGCG
GTGATTCTCA ACGGGGCAAG AATCGGAAAG TACTGCATCA TCGGCGCCAA TTCGCTGATC
GGTGAAGGCA AAGTCATCCC CGATGGCTCG CTGGTCATGG GGTCGCCGGG TAAAGTGGTG
CGCGAGCTCA CCGACGTGCA GAAGAAAATG CTGGAAGCCA GCGCCGCCCA TTACGTACAC
AACGCCCGGC GTTACGCCCG TGACCTGGCC GTGCAGGAAG ACTGA
 
Protein sequence
MKFRLGDSSV QTDPQSWVAP SAVLIGNVKL EAGASVWFNA VLRGDNELIH IGENSNVQDG 
TVMHTDMGSP LAIGKGVTIG HNAMLHGCSV DDYSLIGINA VILNGARIGK YCIIGANSLI
GEGKVIPDGS LVMGSPGKVV RELTDVQKKM LEASAAHYVH NARRYARDLA VQED