Gene PSPTO_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1461 
Symbol 
ID1183098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp1608605 
End bp1609231 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content53% 
IMG OID637392834 
Producthypothetical protein 
Protein accessionNP_791287 
Protein GI28868668 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACGGG TTCGCAAACA CCATCGGCGC TTTTTATCGA AAAGTACTTT CAGGGATATC 
GTAATGCGCT GGTTGCTCGC CCTCTTCTAT GTGTCGTTCA TTCCGCTTTC GCAGGCGGCG 
TTTACTCAGA CCATCGTGCC CAAGGGCAGC GAACAGAAAA TCATCAATAA TAAAGTCATC 
AACACCGAAA GTATTGCCAG CAAGAAGATA GACAAGGTGC TGGTGCTCAA ATCTGCACGT 
CAGTTGCAAT TGATCAGCGG CGGCGAAGCC CTGAAGACGT ATCGCGTCTC GCTGGGTAAA 
AACCCTACGG GCACCAAGTT GCAGGAAGGC GACCAGCGCA CGCCGGAAGG CTTTTACTGG 
CTCGACTGGC GCAAGCCCAG CAATAACTAC AACCTGTCGA TGCACATTTC CTACCCGAAC 
ATCTCAGACT CGGCACGTGC TCGTCGCGAA GGCGTGAAAC CGGGCAGCAT GATCATGATT 
CATGGCACGC CGGTGGATGA GGAGTACCCG GAATGGTATT TCCATACCCT GGACTGGACC 
AACGGCTGCA TCGCGCTGAA GAACAACGAC ATGCGGGAAA TCTGGGATCT GGTGAAAGAC 
GGGACGATGA TCGAGATTCG GCCTTGA
 
Protein sequence
MKRVRKHHRR FLSKSTFRDI VMRWLLALFY VSFIPLSQAA FTQTIVPKGS EQKIINNKVI 
NTESIASKKI DKVLVLKSAR QLQLISGGEA LKTYRVSLGK NPTGTKLQEG DQRTPEGFYW 
LDWRKPSNNY NLSMHISYPN ISDSARARRE GVKPGSMIMI HGTPVDEEYP EWYFHTLDWT 
NGCIALKNND MREIWDLVKD GTMIEIRP