Gene PSPTO_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1460 
Symbol 
ID1183097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1608155 
End bp1608466 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content57% 
IMG OID637392833 
Producthypothetical protein 
Protein accessionNP_791286 
Protein GI28868667 
COG category[S] Function unknown 
COG ID[COG3323] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAAC TTGCCTTCTT TGTTCCACCA AGCCATGTGG ACAAGGTCAA GAACGCCGTA 
TTCGCTGCTG GGGCAGGGCG AATCGGCGCT TACGATCAAT GCTCGTGGCA AGTGCTCGGC
CAAGGTCAGT TCCGCCCGCT GAATGGCAGT CAGCCATTTA TCGGGCAGGG CGGAGTGGTC
GAGTCGGTGG AGGAGTGGAA GGTCGAGTTG GTCGTGGCGG ATGATCTGAT TCAGCAAGCG
GTGCTGGCGC TCAAGCAGAG CCATCCCTAC GAAACGCCTG CTTACGAAGT ATGGCGGCTG
GAAGATTTAT GA
 
Protein sequence
MYKLAFFVPP SHVDKVKNAV FAAGAGRIGA YDQCSWQVLG QGQFRPLNGS QPFIGQGGVV 
ESVEEWKVEL VVADDLIQQA VLALKQSHPY ETPAYEVWRL EDL