| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1458 |
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| Symbol | |
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| ID | 1183095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1602547 |
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| End bp | 1603917 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392831 |
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| Product | periplasmic binding domain/transglycosylase SLT domain fusion protein |
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| Protein accession | NP_791284 |
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| Protein GI | 28868665 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.999918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCGCG TGATCACTCG TAACAGCCCG GCGACTTATT TTCAGGATCG CAACGGTGAA
ACCGGCTTCG AATACGAGCT GGTCAAGCGT TTCGCCGACG ATCTGGGCGT CGAACTGAAG
ATCGAAACAG CCGACAATCT GGACGATCTG TTCGATCAGA TGAACAAACC GGGCGGTCCG
GTCCTCGGCG CAGCGGGCCT GATCGAGACG TCAAAGCGCA AGCAACAGGC GCGTTTCTCG
CACTCTTACC TGGAAGTCAC CCCTCAGGTT GTCTACCGCA ACGGCCAGTC GCGCCCCACC
GACCCCGGCG ATCTGGTGGG TAAACGCATT GTGGTCCTCA AAGGCAGCGC GCACGCCGAG
CAGCTTGCGG CACTCAAGGC GCAGACCCCC GCTATCGAAT ATGAAGAGTC GGACGCGGTC
GAGGTCGTCG ATCTCCTGCG TATGGTCGAC GAAGGCCAGA TTGACCTGAC GCTGGTCGAC
TCCAATGAAC TGGCGATGAA CCAGGTGTAC TTCCCCAATG TGCGTGTGGC GTTTGACCTG
GGCGAAGCCC GTGAGCAGCG CTGGGCGGTG GCACCGGGTG AAGACAACAG CCTGCTCAAC
GAAATAAACG CTTACCTGGA CAAGGTCGAG AAAAACGGCA CGTTGCAGCG CCTCAAGGAC
CGCTATTACG GTCACGTTGA CGTGCTCGGC TACGTCGGCG CCTACACCTT TGCCCAGCAC
CTGCAGGAAC GCTTGCCCAA ATACGAGAAA CACTTCCAGA CATCGGCCAA GAAAGAACAG
GTCGACTGGA GGCTGCTGGC TGCCATCGGC TATCAGGAAT CGATGTGGCA ACCGGCCGTC
ACGTCGAAAA CCGGCGTACG CGGCCTGATG ATGCTGACCC AAAACACTGC TCAGGCGATG
GGCGTGACCA ACAGGCTAGA TGCACGGCAA AGCATTCAGG GCGGGGCCAA GTACTTTGCC
TACGTAAAGG ATCAGCTGGA CGACAAGATT CAAGAGCCCG ATCGTACGTG GCTCGCTCTT
GCTTCCTACA ACATTGGTGG CGGTCATCTC GAAGATGCGC GAAAACTGGC TGAAAACGAG
GGGCTGAACC CTAATAAATG GCTGGACGTT AAAAAAATGT TGCCGCGTCT GGCGCAGAAG
AAGTGGTACA GCAAAACGCG TTACGGTTAT GCCCGGGGCG GCGAGCCCGT GCATTTTGTC
GCCAACATTC GCCGCTACTA CGACATTCTG ACCTGGGTCA CGCAGCCGCA ACTTGAAGGC
AGCCAGGTCG CCGATGGCAA CCTGCACGTT CCCGGCGTCG ACAAGACCCA GCCACCTGCG
CCGACCGCAC CCGTTGTACC CGCTTCCAGC CCGGAAAAGC CCGCGCTCTA G
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| Protein sequence | MLRVITRNSP ATYFQDRNGE TGFEYELVKR FADDLGVELK IETADNLDDL FDQMNKPGGP
VLGAAGLIET SKRKQQARFS HSYLEVTPQV VYRNGQSRPT DPGDLVGKRI VVLKGSAHAE
QLAALKAQTP AIEYEESDAV EVVDLLRMVD EGQIDLTLVD SNELAMNQVY FPNVRVAFDL
GEAREQRWAV APGEDNSLLN EINAYLDKVE KNGTLQRLKD RYYGHVDVLG YVGAYTFAQH
LQERLPKYEK HFQTSAKKEQ VDWRLLAAIG YQESMWQPAV TSKTGVRGLM MLTQNTAQAM
GVTNRLDARQ SIQGGAKYFA YVKDQLDDKI QEPDRTWLAL ASYNIGGGHL EDARKLAENE
GLNPNKWLDV KKMLPRLAQK KWYSKTRYGY ARGGEPVHFV ANIRRYYDIL TWVTQPQLEG
SQVADGNLHV PGVDKTQPPA PTAPVVPASS PEKPAL
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