Gene PSPTO_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1457 
Symbol 
ID1183094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp1602041 
End bp1602550 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content64% 
IMG OID637392830 
Productcytidine/deoxycytidylate deaminase family protein 
Protein accessionNP_791283 
Protein GI28868664 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.81189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCAGC CGCTAATCAT CGACCGCAGC AACGATCAAC ACTTCATGCG TGAGGCGCTG 
GCGCTCGCCG CGCAAGGCGC ACTGCTGGGC GAAGTGCCGG TCGGCGCAGT TGTGGTGCAC 
AACGGCGAGA TCATCGGCCG TGGCTACAAT TGCCCGATCA GCGGCAGCGA CCCGAGCGCG 
CACGCCGAAA TGGTCGCCAT TCGCGACGCC GCCAGGGCGC TGGGCAATTA CCGGCTGCCG 
GGCAGTACGC TCTACGTGAC GCTGGAACCG TGCAGCATGT GCGCCGGTTT GATCGTCCAT 
TCGCGGGTGG CACGTGTAGT TTACGGGGCG CTGGAGCCCA AAGCGGGCAT CGTCCAGAGC 
CAGGGGCAGT TTTTCAGCCA GGGCTTTCTC AATCACCGCG TACTGTTTGA AGGTGGGGTG 
CTGGGCGAGG AGTGTGGGGC AATGCTGAGC GAGTTTTTCA GGCTGCGCCG GGCGGCCAGG 
GATGCAGGAA AAAGCAGGAT CGACGTCTAG
 
Protein sequence
MRQPLIIDRS NDQHFMREAL ALAAQGALLG EVPVGAVVVH NGEIIGRGYN CPISGSDPSA 
HAEMVAIRDA ARALGNYRLP GSTLYVTLEP CSMCAGLIVH SRVARVVYGA LEPKAGIVQS 
QGQFFSQGFL NHRVLFEGGV LGEECGAMLS EFFRLRRAAR DAGKSRIDV