| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1444 |
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| Symbol | leuA |
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| ID | 1183081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1582912 |
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| End bp | 1584669 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637392817 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | NP_791270 |
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| Protein GI | 162533076 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.413521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTCGCC CCTGTGTTCG CTACCCCCAT GTTTTTAGAA CGGCAGGCCG CCTTTATCCG
GCCCCTTCAC TACAAAAGGA TTTCCAGATG ACCATGCTCA ACGATCCATC GAAGAAGTAC
CGCGCGTTCC CGACCATTGA CTTGCCTGAC CGCACCTGGC CATCGAAAAC CATTGATGCG
GCGCCGATCT GGTGCAGTTC CGACCTGCGC GACGGCAATC AGTCGCTGAT CGAGCCGATG
GACTCAGTCA AAAAGCTGCG TTTCTGGAAA ACCCTGGTCA GCGTCGGCGT CAAGGAAATC
GAGGCGTCGT TCCCGGCGGC TTCGCAAACT GACTTCGATT TCGTTCGTAC TCTGATCGAA
GACGGCCACA TCCCGGACGA CACCACCATT CAGGTGCTGA CCCAGGCGCG TGAAGACCTG
ATCGCTCGTA CTTTTGAATC GCTGCGTGGC GCCAAGAAGG CCATCGTTCA CCTGTATAAC
GCTACCTGCC CATCGTTTCG CCGTATTGTC TTCAATCAGG ACAAAGCTGG CGTGAAGGAA
ATCGCGGTCA ACGCTGCCAA GCTGTTCGTG AAATACGCGG CGCAACAGCC AGAAACCCAG
TGGACGTTCG AGTACTCGCC GGAAACCTTC AGTGCCACCG AGCTGGAGTT CGCCAAGGAA
GTCTGCGACG CGGTCATCGA AGTGTGGAAC CCGACGCCCG AGAACAAGGT GATCCTGAAC
CTGCCGGCCA CCGTTGAAGT CGCTACACCC AATATCTATG CGGACCAGAT TGAATGGTTC
GGCCGCCACA TCACTCGCCG CGACAGCGTG CTGATCAGCC TGCACACCCA TAACGACCGT
GGCACTGGCG TGGCCGCTAC CGAACTTGGC CTGATGGCGG GCGCGGACCG GGTCGAAGGC
TGCCTGTTCG GCAACGGCGA GCGTACCGGC AACGTAGATC TGGTCACTGT CGCACTGAAC
CTTTACACCC AAGGCATCAA CCCTGAACTG GACTTTTCGG ACATCGACGG CGTGCGCAAG
GTCGTCGAGG AGTGCAACCA GATTCCGGTT CACCCTCGTC ACCCGTACGT TGGCGACCTG
GTCCACACCG CGTTCTCCGG CTCGCACCAG GACGCCATCC GCAAGGGCTT CACGCAGCAG
AAGGAAGGCG AATTGTGGGA AGTGCCTTAT CTGCCTATCG ACCCGGCTGA TATCGGTCGC
AGCTACGAAG CCGTGATTCG CGTCAACAGC CAGTCCGGCA AAGGCGGCAT CGCCTACCTG
CTGGAGCAGG AATACGGCAT TTCCCTGCCA CGTCGCATGC AAATCGAGTT CAGCCAGGTG
GTTCAGGGTG AAACCGACCG ACTGGGCCTG GAAATGACCG CCGAACAGAT CCACGCGCTG
CTGCGCCGTG AATACCTGCA GGCCAACACG CCTTATGCGT TGATCAGCCA TAGGTTGCAG
GAAGAGAACG GTAACAGCGC GGTAGATGCC GAAGTGCACG TGGATGGCGA AACGCAGCAT
TGGCGCGGCA AGGGCAAAGG AGCTCTGGAA GCACTGGTGG CCGGTCTGCC GGTTGCCGTC
GAAATCATGG ACTATAACGA GCATGCCATC GGCTCGGGCA CCACGGCCAA GGCCGCTGCT
TATATTGAGC TGCGTGTGAA TGGCGACCGT GCCGTGCACG GCGTGGGTAT TGATGAAAAC
ATCACCACGG CCAGCTTCCG CGCCCTGTTT AGCGCATTGA ACCGTTCGCT GAGCCAGGCC
CAGGCCAAAG CGGCCTGA
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| Protein sequence | MPRPCVRYPH VFRTAGRLYP APSLQKDFQM TMLNDPSKKY RAFPTIDLPD RTWPSKTIDA
APIWCSSDLR DGNQSLIEPM DSVKKLRFWK TLVSVGVKEI EASFPAASQT DFDFVRTLIE
DGHIPDDTTI QVLTQAREDL IARTFESLRG AKKAIVHLYN ATCPSFRRIV FNQDKAGVKE
IAVNAAKLFV KYAAQQPETQ WTFEYSPETF SATELEFAKE VCDAVIEVWN PTPENKVILN
LPATVEVATP NIYADQIEWF GRHITRRDSV LISLHTHNDR GTGVAATELG LMAGADRVEG
CLFGNGERTG NVDLVTVALN LYTQGINPEL DFSDIDGVRK VVEECNQIPV HPRHPYVGDL
VHTAFSGSHQ DAIRKGFTQQ KEGELWEVPY LPIDPADIGR SYEAVIRVNS QSGKGGIAYL
LEQEYGISLP RRMQIEFSQV VQGETDRLGL EMTAEQIHAL LRREYLQANT PYALISHRLQ
EENGNSAVDA EVHVDGETQH WRGKGKGALE ALVAGLPVAV EIMDYNEHAI GSGTTAKAAA
YIELRVNGDR AVHGVGIDEN ITTASFRALF SALNRSLSQA QAKAA
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