| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1430 |
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| Symbol | ndk |
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| ID | 1183067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1568159 |
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| End bp | 1568584 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637392803 |
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| Product | nucleoside diphosphate kinase |
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| Protein accession | NP_791256 |
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| Protein GI | 28868637 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0105] Nucleoside diphosphate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGTTC AACGTACTTT CTCCATCATC AAGCCTGACG CCGTTGCAAA GAACGTAATC
GGCGAGATCA CCACTCGTTT CGAAAAAGCC GGTCTGCGCG TTGTCGCTTC CAAACTGAAG
CAGCTGTCCA AGGCCGAAGC TGAAGGTTTC TACGCTGAGC ACAGCGCTCG TGGTTTCTTT
GGCGACCTGG TTGCTTTCAT GATCTCCGGC CCGGTTGTCG TTCAGGTTCT GGAAGGCGAA
AACGCTATCG CTCTGAACCG TGAGCTGATG GGCGCTACCA ACCCTAAAGA AGCTGCTGCC
GGCACCATCC GCGCTGACTT CGCTGATTCC ATCGACGCCA ACGCTGTACA CGGTTCCGAT
TCGGAAGCCG CCGCTGCTCG CGAAATCTCG TACTTCTTCG CAGCTACCGA AGTAACCGCT
CGCTAA
|
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| Protein sequence | MAVQRTFSII KPDAVAKNVI GEITTRFEKA GLRVVASKLK QLSKAEAEGF YAEHSARGFF
GDLVAFMISG PVVVQVLEGE NAIALNRELM GATNPKEAAA GTIRADFADS IDANAVHGSD
SEAAAAREIS YFFAATEVTA R
|
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