Gene PSPTO_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1427 
SymbolhscA 
ID1183064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1565640 
End bp1567502 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content62% 
IMG OID637392800 
Productchaperone protein HscA 
Protein accessionNP_791253 
Protein GI28868634 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR01991] Fe-S protein assembly chaperone HscA 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTAC TGCAAATCGC CGAACCCGGC CTGAGTCCTC AACCGCACCA GCGTCGACTG 
GCTGTGGGTA TCGACCTTGG CACCACCAAT TCTCTGGTTG CTGCAGTGCG CAGCGGCCTG
TCCGAACCGC TGGCCGATGC AGAAGGGCAG GTTATCCTGC CGTCTGCCGT TCGCTATCAC
GCGGATCGCG TCGAAGTGGG GCAGGCGGCG AAAGCCGCGG CCTCGCAGGA CCCGTTCAAC
ACCGTGCTGT CAGTCAAGCG CCTGATGGGC CGTGGCCTGT CCGACGTCAA GCAGTTGGGT
GAGCAGTTGC CTTACCGCTT CGTCGGCGGT GAATCGCACA TGCCGTTCAT CGACACTGTT
CAGGGGGCTA AAAGCCCGGT TGAAGTGTCT GCCGACATTC TCAAGGTGTT GCGTCAGCGT
GCTGAGGCGG CGCTGGGCGG CGAACTGGTC GGTGCGGTCA TCACTGTTCC GGCCTATTTC
GACGACTCTC AGCGTCAGGC GACCAAAGAT GCCGCCAAGC TGGCCGGCCT CAATGTACTG
CGCCTGCTCA ATGAGCCGAC CGCTGCGGCC GTTGCCTATG GCCTGGACCA GAAAGCCGAG
GGCGTGATCG CCATCTACGA CCTGGGCGGC GGGACCTTCG ATATTTCGAT CCTGCGCCTG
ACGGGCGGCG TCTTTGAAGT ACTGGCCACC GGCGGTGATA CCGCGCTGGG CGGTGACGAT
TTCGATCATG CAATTGCCAG CTGGATTGTC GCCGACGCCG GCCTGTCTGC CGATCTGGAC
CCTTCCGCAC AGCGCAGCCT GTTACAGGCG GCCTGCTCGG CCAAGGAAGC GCTGACCGAC
GCCGAGTTCG TCGAGGTTAC TCATGGCGAG TGGCGCGGCA CCCTGACTCG CGACGCGCTC
AATGCGCTGA TCGAGCCGAT GATTGCGCGC AGCCTGAAAG CCTGCCGTCG TGCGGTGCGT
GACACCGGCA TCGAGCTTGA AGAAGTCGAG GCGGTGGTCA TGGTCGGTGG TTCGACCCGT
GTTCCGCGTG TGCGTGAGGC CGTCGCCGAA TTGTTCGGCC GTCAGCCGCT GACCCAGATT
GACCCGGATC AAGTGGTGGC CATTGGGGCT GCGATCCAGG CCGACACACT GGCAGGCAAC
AAGCGTGATG GTGGCGAGCT GCTGTTGCTC GACGTGATTC CGCTGTCGCT GGGGCTCGAA
ACCATGGGCG GGCTCATGGA AAAGGTCATT CCGCGCAACA CCACGATCCC TGTAGCGCGT
GGTCAGGAAT TCACTACTTA CAAAGATGGC CAGACGGCCA TGAAAATTCA TGTACTGCAG
GGCGAGCGTG AGCTGGTCAG CGATTGCCGT TCCCTGGCGC GTTTTGAATT GCGTGGCATC
CCGCCGATGG TCGCGGGTGC GGCAAAGATT CGTGTCACCT TCCAGGTCGA TGCAGACGGT
TTGCTCAGCG TTTCGGCGCG TGAAATGGGC TCGGGTATCG AGTCGAGCAT TCAGGTCAAG
CCGTCCTACG GGCTGACCGA TGACGAGGTC ACTCGTATGC TCAAGGATTC CTTCGAGTAT
GCCGGCGACG ACAAGGTCGC TCGTGTGCTG CGTGAGCATC AGGTTGATGC CGAGCGCCTG
CTCGAAGCTG TTCAGGGTGC CCTGGACGCC GATGGCGAGC GTCTTCTCGA CGAAGAAGAG
CGCCTGGTTA TCAACCTGCA GATGGACGAA CTCCGTGAAC TGATGCAAGG CACCGATGGT
TATGCCATCG AGCAGCAGAC CAAGCGTCTG TCGCAGGTGA CCGATGCATT TGCTGCCCGA
CGCCTAGATT CGACGGTAAA AGCCGCACTG GCCGGGCGCA ACTTGAATGA GATTGAGGAG
TAA
 
Protein sequence
MALLQIAEPG LSPQPHQRRL AVGIDLGTTN SLVAAVRSGL SEPLADAEGQ VILPSAVRYH 
ADRVEVGQAA KAAASQDPFN TVLSVKRLMG RGLSDVKQLG EQLPYRFVGG ESHMPFIDTV
QGAKSPVEVS ADILKVLRQR AEAALGGELV GAVITVPAYF DDSQRQATKD AAKLAGLNVL
RLLNEPTAAA VAYGLDQKAE GVIAIYDLGG GTFDISILRL TGGVFEVLAT GGDTALGGDD
FDHAIASWIV ADAGLSADLD PSAQRSLLQA ACSAKEALTD AEFVEVTHGE WRGTLTRDAL
NALIEPMIAR SLKACRRAVR DTGIELEEVE AVVMVGGSTR VPRVREAVAE LFGRQPLTQI
DPDQVVAIGA AIQADTLAGN KRDGGELLLL DVIPLSLGLE TMGGLMEKVI PRNTTIPVAR
GQEFTTYKDG QTAMKIHVLQ GERELVSDCR SLARFELRGI PPMVAGAAKI RVTFQVDADG
LLSVSAREMG SGIESSIQVK PSYGLTDDEV TRMLKDSFEY AGDDKVARVL REHQVDAERL
LEAVQGALDA DGERLLDEEE RLVINLQMDE LRELMQGTDG YAIEQQTKRL SQVTDAFAAR
RLDSTVKAAL AGRNLNEIEE