Gene PSPTO_1426 details

Gene Information

• Locus tag: PSPTO_1426
• Symbol: hscB
• ID: 1183063
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1565074
• End bp: 1565595
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637392799
• Product: co-chaperone Hsc20
• Protein accession: NP_791252
• Protein GI: 28868633
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGCAGTC CCTGTCATTT TGCCCTGTTC GAACTCAAGC CCGAGTTTCA GCTTGATCTC 
GACCAGTTGG CAACGCGCTA CCGTGAACTG GCGCGCAACG TCCACCCGGA TCGCTTCGCT 
GACGCTCCCG AGCGTGAGCA GCGTCTGGCG CTGGAGCGTT CAGCCAGTCT CAATGAAGCC 
TATCAGACCC TGAAGAGCCC GCCGAAACGG GCGCGCTACC TTCTGGCAAT GAATGGCAAC 
GAGGTGCCGC TTGAGGTCAC CGTGCACGAT CCTGAATTTC TTCTGCAGCA GATGCAATTG 
CGCGAAGATC TTGAGGACTT GCAGGACGAG GCCGATCTTG CCGGGGTGGC GACCTTCAAG 
CGTCAGCTCA AGGTCGCTCA GGACGAGTTG AACCAGAGCT TCGCTGCCTG TTGGAATGAC 
GCTGCACAGC GCGAGCACGC TGAAAAGCTG ATGCGGCGTA TGCAGTTTCT CGACAAGCTT 
TCTCACGAAG TGCGCCAGTT AGAAGAGCGC CTCGACGATT AA 

 

Protein sequence

MGSPCHFALF ELKPEFQLDL DQLATRYREL ARNVHPDRFA DAPEREQRLA LERSASLNEA 
YQTLKSPPKR ARYLLAMNGN EVPLEVTVHD PEFLLQQMQL REDLEDLQDE ADLAGVATFK 
RQLKVAQDEL NQSFAACWND AAQREHAEKL MRRMQFLDKL SHEVRQLEER LDD