Gene PSPTO_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1409 
Symbol 
ID1183045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1549288 
End bp1550133 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content49% 
IMG OID637392781 
Producthypothetical protein 
Protein accessionNP_791235 
Protein GI28868616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0211733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGA CGACCCTATG GGCTTTAGCC TTTGCAATGT TGGCAGGGTG TGGGGTTTCG 
GGGCCGGCGC CGGGAAGTGA TATTCAGGGT GCCCAGGCAG AGATGAAAAC ACCCGTTAAA
CTAAATCTGG ATGCCTACAC CTCAAAAAAA CTGGATGCTG TGCTGGAAGC CCGCACCAAC
AAAAGTTATA TGAATAAAGG TCAGCTGATC GACCTTGTAT CAGGAGCGTT TTTAGGAACA
CCGTACCGCT CAAACATGTT GGTGGGCTCA GCGAATGTAC CTGAACAATT AGTCATCGAC
TTCAGAGGTC TGGATTGTTT TGCTTATCTG GATTACGTCG AAGCGTTTCG AAGATCAACA
TCGCAGCAGG ATTTTGTGAG GAATCTCGTT CAGGTTCGTT ACAAGGGTGG CGATGTTGAC
TTTTTGAATC GCAAGCACTT TTTCACGGAT TGGGCTTACG GAACGGCATA CCCTGTGGCG
GATGACATTA CCGCGCAGAT AAGCCCCGGT GCGGTAAGTG TCAGAAAACG CCTTAATGAA
AGGGCCAAAG GCAAAGTCTA TCTGCCAGGG TTGCCTGTGG TTGAGCGTAG CATGACGTAT
ATCCCGAGCC GCCTTGTCGA CAGTCAGGTG GTGAGCCACC TGCGCACCGG TGATTACATT
GGCATTTACA CCCCGCTTCC CGGGCTGGAT GTGACACACG TCGGTTTCTT TATCGTGACG
GATAAAGGCC CTGTCTTGCG AAATGCATCT TCACGAAAAG AAAACAGAAA GGTGATGGAT
TTGCCTTTTC TGGACTATGT ATCGGAAAAG CCAGGGATTG TTGTTTTCAG GGCAAAAGAC
AATTGA
 
Protein sequence
MQKTTLWALA FAMLAGCGVS GPAPGSDIQG AQAEMKTPVK LNLDAYTSKK LDAVLEARTN 
KSYMNKGQLI DLVSGAFLGT PYRSNMLVGS ANVPEQLVID FRGLDCFAYL DYVEAFRRST
SQQDFVRNLV QVRYKGGDVD FLNRKHFFTD WAYGTAYPVA DDITAQISPG AVSVRKRLNE
RAKGKVYLPG LPVVERSMTY IPSRLVDSQV VSHLRTGDYI GIYTPLPGLD VTHVGFFIVT
DKGPVLRNAS SRKENRKVMD LPFLDYVSEK PGIVVFRAKD N