Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1390 |
Symbol | hrpT |
ID | 1183026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1530986 |
End bp | 1531189 |
Gene Length | 204 bp |
Protein Length | 67 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392762 |
Product | type III secretion protein HrpT |
Protein accession | NP_791217 |
Protein GI | 28868598 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATTC GTAGCCTAAC GCTCTTGCTC TTGCTGTTTG CTACGCTGAC AGGGTGTGCC ACCCACGGCT GTGCGGGGAA CGCTTGCAAA CGCCCGGACT CCAACAACCG CGAGCTGGTC ATTTGGTGGC CGCCCGACAT GCGCGAAGGT CTGGACGACC GGGACCATGA GCGGGATTAC ACTGTCGTGC AGTTAAAGGA TTAG
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Protein sequence | MMIRSLTLLL LLFATLTGCA THGCAGNACK RPDSNNRELV IWWPPDMREG LDDRDHERDY TVVQLKD
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